Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 SNORA72.2-201ENST00000365028 127 ntBASIC1.96□□□□□ -2.1
LDLRP01130 SNORA67.2-201ENST00000384300 149 ntBASIC1.96□□□□□ -2.1
LDLRP01130 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
LDLRP01130 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
LDLRP01130 AL135790.2-201ENST00000437701 267 ntBASIC1.96□□□□□ -2.1
LDLRP01130 Y_RNA.637-201ENST00000459424 114 ntBASIC1.96□□□□□ -2.1
LDLRP01130 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.96□□□□□ -2.1
LDLRP01130 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.96□□□□□ -2.1
LDLRP01130 RNU6-1278P-201ENST00000516130 107 ntBASIC1.96□□□□□ -2.1
LDLRP01130 RNU6-436P-201ENST00000516171 114 ntBASIC1.96□□□□□ -2.1
LDLRP01130 RNU6-155P-201ENST00000516347 100 ntBASIC1.96□□□□□ -2.1
LDLRP01130 SUMO2P18-201ENST00000518873 252 ntBASIC1.96□□□□□ -2.1
LDLRP01130 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.96□□□□□ -2.1
LDLRP01130 MIR3144-201ENST00000579460 79 ntBASIC1.96□□□□□ -2.1
LDLRP01130 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
LDLRP01130 AL627230.6-201ENST00000611129 280 ntBASIC1.96□□□□□ -2.1
LDLRP01130 AC104465.1-201ENST00000611365 139 ntBASIC1.96□□□□□ -2.1
LDLRP01130 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.96□□□□□ -2.1
LDLRP01130 AC068205.3-201ENST00000636385 468 ntBASIC1.96□□□□□ -2.1
LDLRP01130 MIR3674-201ENST00000636576 68 ntBASIC1.96□□□□□ -2.1
LDLRP01130 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LDLRP01130 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.95□□□□□ -2.1
LDLRP01130 MIR340-201ENST00000362125 95 ntBASIC1.95□□□□□ -2.1
LDLRP01130 RNU6-1272P-201ENST00000362776 107 ntBASIC1.95□□□□□ -2.1
LDLRP01130 Y_RNA.118-201ENST00000363300 101 ntBASIC1.95□□□□□ -2.1
LDLRP01130 Y_RNA.329-201ENST00000365209 107 ntBASIC1.95□□□□□ -2.1
LDLRP01130 RNY1P5-201ENST00000383890 115 ntBASIC1.95□□□□□ -2.1
LDLRP01130 Y_RNA.508-201ENST00000384502 114 ntBASIC1.95□□□□□ -2.1
LDLRP01130 MIR518A2-201ENST00000384966 87 ntBASIC1.95□□□□□ -2.1
LDLRP01130 MIR586-201ENST00000385035 97 ntBASIC1.95□□□□□ -2.1
LDLRP01130 RNU11-3P-201ENST00000391111 133 ntBASIC1.95□□□□□ -2.1
LDLRP01130 AL512604.1-201ENST00000404812 257 ntBASIC1.95□□□□□ -2.1
LDLRP01130 MIR548I2-201ENST00000408348 149 ntBASIC1.95□□□□□ -2.1
LDLRP01130 RNU5E-9P-201ENST00000411164 104 ntBASIC1.95□□□□□ -2.1
LDLRP01130 AC024067.1-201ENST00000426199 223 ntBASIC1.95□□□□□ -2.1
LDLRP01130 RNU7-57P-201ENST00000459540 60 ntBASIC1.95□□□□□ -2.1
LDLRP01130 AC091021.1-201ENST00000468051 388 ntBASIC1.95□□□□□ -2.1
LDLRP01130 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
LDLRP01130 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.95□□□□□ -2.1
LDLRP01130 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.95□□□□□ -2.1
LDLRP01130 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
LDLRP01130 AC008555.8-201ENST00000623602 2168 ntBASIC1.95□□□□□ -2.1
LDLRP01130 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LDLRP01130 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LDLRP01130 RNU6-23P-201ENST00000363283 107 ntBASIC1.94□□□□□ -2.1
LDLRP01130 RNU6-801P-201ENST00000364087 105 ntBASIC1.94□□□□□ -2.1
LDLRP01130 Y_RNA.262-201ENST00000364641 102 ntBASIC1.94□□□□□ -2.1
LDLRP01130 Y_RNA.398-201ENST00000383952 99 ntBASIC1.94□□□□□ -2.1
LDLRP01130 Y_RNA.441-201ENST00000384123 112 ntBASIC1.94□□□□□ -2.1
LDLRP01130 MIR597-201ENST00000384968 97 ntBASIC1.94□□□□□ -2.1
LDLRP01130 MIR29C-201ENST00000385231 88 ntBASIC1.94□□□□□ -2.1
LDLRP01130 MIR548B-201ENST00000385247 97 ntBASIC1.94□□□□□ -2.1
LDLRP01130 RNU6-57P-201ENST00000411348 103 ntBASIC1.94□□□□□ -2.1
LDLRP01130 AL606753.1-201ENST00000427435 87 ntBASIC1.94□□□□□ -2.1
LDLRP01130 AC108667.1-201ENST00000428618 249 ntBASIC1.94□□□□□ -2.1
LDLRP01130 MTCO1P44-201ENST00000441935 243 ntBASIC1.94□□□□□ -2.1
LDLRP01130 AC114982.1-201ENST00000469402 321 ntBASIC1.94□□□□□ -2.1
LDLRP01130 MIR5692C2-201ENST00000577959 77 ntBASIC1.94□□□□□ -2.1
LDLRP01130 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
LDLRP01130 snoU13.31-201ENST00000607291 104 ntBASIC1.94□□□□□ -2.1
LDLRP01130 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
LDLRP01130 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.93□□□□□ -2.1
LDLRP01130 Y_RNA.8-201ENST00000362353 102 ntBASIC1.93□□□□□ -2.1
LDLRP01130 RNA5SP493-201ENST00000364115 91 ntBASIC1.93□□□□□ -2.1
LDLRP01130 RNU6-1264P-201ENST00000383891 107 ntBASIC1.93□□□□□ -2.1
LDLRP01130 RNU6-1310P-201ENST00000384153 107 ntBASIC1.93□□□□□ -2.1
LDLRP01130 RNU6-975P-201ENST00000384296 105 ntBASIC1.93□□□□□ -2.1
LDLRP01130 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
LDLRP01130 AL445646.1-201ENST00000431784 216 ntBASIC1.93□□□□□ -2.1
LDLRP01130 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.93□□□□□ -2.1
LDLRP01130 U8.19-201ENST00000459095 133 ntBASIC1.93□□□□□ -2.1
LDLRP01130 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
LDLRP01130 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.93□□□□□ -2.1
LDLRP01130 MRPS17P9-201ENST00000511924 393 ntBASIC1.93□□□□□ -2.1
LDLRP01130 RNU6-948P-201ENST00000516374 107 ntBASIC1.93□□□□□ -2.1
LDLRP01130 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.93□□□□□ -2.1
LDLRP01130 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.93□□□□□ -2.1
LDLRP01130 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.93□□□□□ -2.1
LDLRP01130 AC008873.1-201ENST00000625051 138 ntBASIC1.93□□□□□ -2.1
LDLRP01130 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
LDLRP01130 AC132825.6-201ENST00000638861 357 ntBASIC1.93□□□□□ -2.1
LDLRP01130 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
LDLRP01130 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LDLRP01130 RNU1-58P-201ENST00000362413 163 ntBASIC1.92□□□□□ -2.1
LDLRP01130 SNORD115-30-201ENST00000364117 82 ntBASIC1.92□□□□□ -2.1
LDLRP01130 RNU6-1130P-201ENST00000365434 107 ntBASIC1.92□□□□□ -2.1
LDLRP01130 MIR583-201ENST00000384846 75 ntBASIC1.92□□□□□ -2.1
LDLRP01130 RNU6-763P-201ENST00000390865 106 ntBASIC1.92□□□□□ -2.1
LDLRP01130 RNA5SP475-201ENST00000410568 110 ntBASIC1.92□□□□□ -2.1
LDLRP01130 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.92□□□□□ -2.1
LDLRP01130 BTF3P11-201ENST00000426582 477 ntBASIC1.92□□□□□ -2.1
LDLRP01130 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
LDLRP01130 AL353689.1-201ENST00000438895 199 ntBASIC1.92□□□□□ -2.1
LDLRP01130 AC074290.1-201ENST00000448883 135 ntBASIC1.92□□□□□ -2.1
LDLRP01130 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.92□□□□□ -2.1
LDLRP01130 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.92□□□□□ -2.1
LDLRP01130 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LDLRP01130 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LDLRP01130 AL159152.1-201ENST00000635019 2587 ntBASIC1.92□□□□□ -2.1
LDLRP01130 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms