Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.5□□□□□ -2.33
CPSF4O95639 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.5□□□□□ -2.33
CPSF4O95639 Y_RNA.655-201ENST00000515919 96 ntBASIC0.5□□□□□ -2.33
CPSF4O95639 MIR2355-201ENST00000517199 87 ntBASIC0.5□□□□□ -2.33
CPSF4O95639 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CPSF4O95639 AC087588.2-201ENST00000617667 426 ntBASIC0.5□□□□□ -2.33
CPSF4O95639 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
CPSF4O95639 AL669831.3-213ENST00000636676 183 ntBASIC0.5□□□□□ -2.33
CPSF4O95639 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CPSF4O95639 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CPSF4O95639 CASC19-280ENST00000642102 1351 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 Y_RNA.101-201ENST00000363154 102 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 Y_RNA.172-201ENST00000363765 102 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 U8.5-201ENST00000364528 136 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 SNORD114-22-201ENST00000365423 72 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 RNU6-1105P-201ENST00000384774 107 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 MIR452-201ENST00000385020 85 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 MIR605-201ENST00000385078 83 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 MIR516B2-201ENST00000385190 85 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 AL031003.1-201ENST00000404229 172 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 Y_RNA.592-201ENST00000410274 109 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 RNU6-733P-201ENST00000410759 104 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.49□□□□□ -2.33
CPSF4O95639 RPS20P10-201ENST00000451209 253 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 RPS29P1-201ENST00000465274 159 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 MTND4P17-201ENST00000470444 350 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.49□□□□□ -2.33
CPSF4O95639 SNORA25.10-201ENST00000515926 124 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 SNORA70.12-201ENST00000516084 153 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 AC136628.3-201ENST00000521868 290 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.49□□□□□ -2.33
CPSF4O95639 MIR4781-201ENST00000585250 76 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.49□□□□□ -2.33
CPSF4O95639 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.49□□□□□ -2.33
CPSF4O95639 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.49□□□□□ -2.33
CPSF4O95639 RNA5SP264-201ENST00000363115 107 ntBASIC0.48□□□□□ -2.33
CPSF4O95639 Y_RNA.330-201ENST00000365230 109 ntBASIC0.48□□□□□ -2.33
CPSF4O95639 RNU6-767P-201ENST00000384132 107 ntBASIC0.48□□□□□ -2.33
CPSF4O95639 SNORA69.1-201ENST00000390904 137 ntBASIC0.48□□□□□ -2.33
CPSF4O95639 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CPSF4O95639 RNU6-1156P-201ENST00000410365 100 ntBASIC0.48□□□□□ -2.33
CPSF4O95639 RNA5SP255-201ENST00000516370 107 ntBASIC0.48□□□□□ -2.33
CPSF4O95639 MIR4714-201ENST00000580728 77 ntBASIC0.48□□□□□ -2.33
CPSF4O95639 MIR4762-201ENST00000585261 75 ntBASIC0.48□□□□□ -2.33
CPSF4O95639 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CPSF4O95639 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.48□□□□□ -2.33
CPSF4O95639 SNORA25.3-201ENST00000363205 127 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 Y_RNA.577-201ENST00000384794 101 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 MIR625-201ENST00000385047 85 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CPSF4O95639 RNU2-54P-201ENST00000410299 190 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 Y_RNA.646-201ENST00000410980 101 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 RNU2-61P-201ENST00000411069 191 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 MTND1P4-201ENST00000435196 415 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.47□□□□□ -2.33
CPSF4O95639 RPL30P15-201ENST00000457129 321 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 RNU7-41P-201ENST00000515917 61 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 SNORA74.3-201ENST00000517108 154 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.47□□□□□ -2.33
CPSF4O95639 AP003716.2-201ENST00000528260 108 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 AC006380.1-201ENST00000603598 186 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 AC240442.1-201ENST00000616055 283 ntBASIC0.47□□□□□ -2.33
CPSF4O95639 AC023934.1-201ENST00000574529 2389 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 MIR103A2-201ENST00000362154 78 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 RNY3P11-201ENST00000364153 102 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 Y_RNA.253-201ENST00000364562 112 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 AC117470.1-201ENST00000381974 330 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 MIR520C-201ENST00000385005 87 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 MIR522-201ENST00000385071 87 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 MIR1185-1-201ENST00000408598 86 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 MIR1276-201ENST00000408707 83 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 RNU6-370P-201ENST00000411008 104 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 RNU6-1199P-201ENST00000411249 104 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 FCF1P9-201ENST00000412546 282 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 AL390729.2-201ENST00000416137 156 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 MLLT10P1-201ENST00000418346 262 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 RPS26P5-201ENST00000418544 335 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 AL035398.1-201ENST00000430869 322 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 FCF1P4-201ENST00000448326 183 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 RNU6-966P-201ENST00000516479 104 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 Y_RNA.691-201ENST00000516611 103 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 AC023827.1-201ENST00000569247 97 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 AC098679.4-201ENST00000624241 654 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 AC027514.1-201ENST00000588561 1603 ntBASIC0.46□□□□□ -2.34
CPSF4O95639 RNU6-845P-201ENST00000362578 103 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNU6-1188P-201ENST00000363795 107 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNU6-1335P-201ENST00000365426 107 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNU6-20P-201ENST00000384106 107 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 Y_RNA.446-201ENST00000384178 104 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNU6-1297P-201ENST00000384415 104 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNU6-310P-201ENST00000384655 107 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 MIR136-201ENST00000385207 82 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 SNORA75.6-201ENST00000391318 127 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNU6-1304P-201ENST00000411374 106 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 PDCL2P1-201ENST00000419302 352 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms