Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
BEST1O76090 GHRLOS.1-201ENST00000610995 70 ntBASIC1.38□□□□□ -2.19
BEST1O76090 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
BEST1O76090 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.38□□□□□ -2.19
BEST1O76090 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
BEST1O76090 AL391987.6-201ENST00000305671 199 ntBASIC1.37□□□□□ -2.19
BEST1O76090 Y_RNA.579-201ENST00000390939 94 ntBASIC1.37□□□□□ -2.19
BEST1O76090 RNU6-321P-201ENST00000410912 106 ntBASIC1.37□□□□□ -2.19
BEST1O76090 Y_RNA.621-201ENST00000411065 96 ntBASIC1.37□□□□□ -2.19
BEST1O76090 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.37□□□□□ -2.19
BEST1O76090 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.37□□□□□ -2.19
BEST1O76090 MTATP6P23-201ENST00000440153 476 ntBASIC1.37□□□□□ -2.19
BEST1O76090 AC005840.1-201ENST00000498412 377 ntBASIC1.37□□□□□ -2.19
BEST1O76090 RNU6-1170P-201ENST00000515974 106 ntBASIC1.37□□□□□ -2.19
BEST1O76090 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
BEST1O76090 AL359821.1-201ENST00000605519 182 ntBASIC1.37□□□□□ -2.19
BEST1O76090 AC027279.3-201ENST00000625055 122 ntBASIC1.37□□□□□ -2.19
BEST1O76090 RNU6-833P-201ENST00000363486 107 ntBASIC1.36□□□□□ -2.19
BEST1O76090 Y_RNA.431-201ENST00000384086 102 ntBASIC1.36□□□□□ -2.19
BEST1O76090 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
BEST1O76090 AL451046.2-201ENST00000403074 277 ntBASIC1.36□□□□□ -2.19
BEST1O76090 AC022028.1-201ENST00000412054 408 ntBASIC1.36□□□□□ -2.19
BEST1O76090 RNU6-475P-201ENST00000516073 104 ntBASIC1.36□□□□□ -2.19
BEST1O76090 RNU6-922P-201ENST00000516753 99 ntBASIC1.36□□□□□ -2.19
BEST1O76090 AC005972.2-201ENST00000604690 348 ntBASIC1.36□□□□□ -2.19
BEST1O76090 AL133255.1-201ENST00000606374 441 ntBASIC1.36□□□□□ -2.19
BEST1O76090 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
BEST1O76090 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
BEST1O76090 Y_RNA.112-201ENST00000363250 102 ntBASIC1.35□□□□□ -2.19
BEST1O76090 Y_RNA.458-201ENST00000384240 102 ntBASIC1.35□□□□□ -2.19
BEST1O76090 SNORD116-13-201ENST00000384408 92 ntBASIC1.35□□□□□ -2.19
BEST1O76090 MIR891A-201ENST00000401237 79 ntBASIC1.35□□□□□ -2.19
BEST1O76090 RPEP5-201ENST00000441137 268 ntBASIC1.35□□□□□ -2.19
BEST1O76090 AC093850.1-201ENST00000454121 251 ntBASIC1.35□□□□□ -2.19
BEST1O76090 U8.20-201ENST00000459445 131 ntBASIC1.35□□□□□ -2.19
BEST1O76090 CYCTP-201ENST00000504253 315 ntBASIC1.35□□□□□ -2.19
BEST1O76090 RNU6-1053P-201ENST00000515930 101 ntBASIC1.35□□□□□ -2.19
BEST1O76090 RNU6-966P-201ENST00000516479 104 ntBASIC1.35□□□□□ -2.19
BEST1O76090 RNU6-165P-201ENST00000517170 99 ntBASIC1.35□□□□□ -2.19
BEST1O76090 AC011604.1-201ENST00000545978 196 ntBASIC1.35□□□□□ -2.19
BEST1O76090 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
BEST1O76090 AL357312.1-201ENST00000603879 298 ntBASIC1.35□□□□□ -2.19
BEST1O76090 SNORD58B-201ENST00000607313 66 ntBASIC1.35□□□□□ -2.19
BEST1O76090 AC004832.4-201ENST00000608952 331 ntBASIC1.35□□□□□ -2.19
BEST1O76090 AL008636.1-201ENST00000625038 1018 ntBASIC1.35□□□□□ -2.19
BEST1O76090 AC068647.2-201ENST00000637380 353 ntBASIC1.35□□□□□ -2.19
BEST1O76090 RNA5SP327-201ENST00000362494 101 ntBASIC1.34□□□□□ -2.19
BEST1O76090 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
BEST1O76090 Y_RNA.329-201ENST00000365209 107 ntBASIC1.34□□□□□ -2.19
BEST1O76090 RNU6-1080P-201ENST00000383982 107 ntBASIC1.34□□□□□ -2.19
BEST1O76090 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
BEST1O76090 MTND4LP11-201ENST00000422184 280 ntBASIC1.34□□□□□ -2.19
BEST1O76090 AC024067.1-201ENST00000426199 223 ntBASIC1.34□□□□□ -2.19
BEST1O76090 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.34□□□□□ -2.19
BEST1O76090 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.34□□□□□ -2.19
BEST1O76090 RNU6-917P-201ENST00000516294 104 ntBASIC1.34□□□□□ -2.19
BEST1O76090 AL117336.2-201ENST00000602435 335 ntBASIC1.34□□□□□ -2.19
BEST1O76090 AC120024.3-201ENST00000603167 156 ntBASIC1.34□□□□□ -2.19
BEST1O76090 AL080274.1-201ENST00000605565 220 ntBASIC1.34□□□□□ -2.19
BEST1O76090 AC011373.1-201ENST00000607270 237 ntBASIC1.34□□□□□ -2.19
BEST1O76090 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
BEST1O76090 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
BEST1O76090 SNORD68-201ENST00000363214 84 ntBASIC1.33□□□□□ -2.2
BEST1O76090 RNU4-50P-201ENST00000364361 141 ntBASIC1.33□□□□□ -2.2
BEST1O76090 U8.5-201ENST00000364528 136 ntBASIC1.33□□□□□ -2.2
BEST1O76090 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
BEST1O76090 RNU6-53P-201ENST00000365367 106 ntBASIC1.33□□□□□ -2.2
BEST1O76090 Y_RNA.439-201ENST00000384119 94 ntBASIC1.33□□□□□ -2.2
BEST1O76090 SNORD63-201ENST00000384262 68 ntBASIC1.33□□□□□ -2.2
BEST1O76090 RNY1P14-201ENST00000384426 108 ntBASIC1.33□□□□□ -2.2
BEST1O76090 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
BEST1O76090 DYNLT3P2-201ENST00000442517 295 ntBASIC1.33□□□□□ -2.2
BEST1O76090 RPS20P10-201ENST00000451209 253 ntBASIC1.33□□□□□ -2.2
BEST1O76090 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
BEST1O76090 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.33□□□□□ -2.2
BEST1O76090 MIR4762-201ENST00000585261 75 ntBASIC1.33□□□□□ -2.2
BEST1O76090 AC006157.1-201ENST00000611750 366 ntBASIC1.33□□□□□ -2.2
BEST1O76090 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.33□□□□□ -2.2
BEST1O76090 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
BEST1O76090 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
BEST1O76090 Y_RNA.331-201ENST00000365267 102 ntBASIC1.32□□□□□ -2.2
BEST1O76090 Y_RNA.395-201ENST00000383945 109 ntBASIC1.32□□□□□ -2.2
BEST1O76090 SNORA72-201ENST00000384339 132 ntBASIC1.32□□□□□ -2.2
BEST1O76090 RNU6-163P-201ENST00000384396 106 ntBASIC1.32□□□□□ -2.2
BEST1O76090 SNORD41-201ENST00000386967 70 ntBASIC1.32□□□□□ -2.2
BEST1O76090 TRMT112P2-201ENST00000512910 132 ntBASIC1.32□□□□□ -2.2
BEST1O76090 AL591926.4-201ENST00000616895 298 ntBASIC1.32□□□□□ -2.2
BEST1O76090 Y_RNA.172-201ENST00000363765 102 ntBASIC1.31□□□□□ -2.2
BEST1O76090 SNORD14.1-201ENST00000365609 90 ntBASIC1.31□□□□□ -2.2
BEST1O76090 MIR1302-11-201ENST00000408051 138 ntBASIC1.31□□□□□ -2.2
BEST1O76090 MIR1302-9-201ENST00000408365 138 ntBASIC1.31□□□□□ -2.2
BEST1O76090 MIR1302-10-201ENST00000408734 138 ntBASIC1.31□□□□□ -2.2
BEST1O76090 RNU6-855P-201ENST00000410395 104 ntBASIC1.31□□□□□ -2.2
BEST1O76090 RNU6-1054P-201ENST00000411293 104 ntBASIC1.31□□□□□ -2.2
BEST1O76090 MIR1302-2-201ENST00000607096 138 ntBASIC1.31□□□□□ -2.2
BEST1O76090 uc_338.22-201ENST00000622722 187 ntBASIC1.31□□□□□ -2.2
BEST1O76090 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
BEST1O76090 Y_RNA.4-201ENST00000362333 112 ntBASIC1.3□□□□□ -2.2
BEST1O76090 Y_RNA.80-201ENST00000362996 102 ntBASIC1.3□□□□□ -2.2
BEST1O76090 RNU6-1323P-201ENST00000384025 107 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms