Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 MIR151B-201ENST00000584249 96 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 AL096861.1-201ENST00000610899 123 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
UPK3AO75631 SNORD114-7-201ENST00000362520 77 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 Y_RNA.592-201ENST00000410274 109 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 RNU6-1156P-201ENST00000410365 100 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 RNU6-370P-201ENST00000411008 104 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 RPS3AP1-201ENST00000413190 320 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.75□□□□□ -2.29
UPK3AO75631 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.75□□□□□ -2.29
UPK3AO75631 SNORA70.12-201ENST00000516084 153 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.75□□□□□ -2.29
UPK3AO75631 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
UPK3AO75631 AC006380.1-201ENST00000603598 186 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 RMST_2.1-201ENST00000617263 136 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 AC087588.2-201ENST00000617667 426 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 MIR6788-201ENST00000618842 66 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 AC098679.4-201ENST00000624241 654 ntBASIC0.75□□□□□ -2.29
UPK3AO75631 RNU6-845P-201ENST00000362578 103 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 RNU6-969P-201ENST00000383900 105 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 RNU6-1105P-201ENST00000384774 107 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 Y_RNA.577-201ENST00000384794 101 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 MIR520E-201ENST00000384867 87 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 MIR489-201ENST00000384923 84 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 AL031003.1-201ENST00000404229 172 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 Y_RNA.646-201ENST00000410980 101 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 RNU6-1304P-201ENST00000411374 106 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.74□□□□□ -2.29
UPK3AO75631 AL162725.1-201ENST00000435405 301 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 RNU7-90P-201ENST00000459216 62 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 RNU7-169P-201ENST00000459456 61 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 RPS29P1-201ENST00000465274 159 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 RPS26P48-201ENST00000491713 339 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 AC114811.1-201ENST00000507207 168 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 RNU6-197P-201ENST00000516680 100 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 AC136628.3-201ENST00000521868 290 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.74□□□□□ -2.29
UPK3AO75631 AC004832.4-201ENST00000608952 331 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 AL591926.4-201ENST00000616895 298 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 AL008636.1-201ENST00000625038 1018 ntBASIC0.74□□□□□ -2.29
UPK3AO75631 Y_RNA.336-201ENST00000365307 109 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 Y_RNA.361-201ENST00000365515 120 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 RNU6-310P-201ENST00000384655 107 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 MIR613-201ENST00000385248 95 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 SNORA75.2-201ENST00000391138 150 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 SNORA75.3-201ENST00000391231 150 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 RNU6-876P-201ENST00000391295 104 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.73□□□□□ -2.29
UPK3AO75631 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.73□□□□□ -2.29
UPK3AO75631 FGF7P6-202ENST00000451282 293 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 AC245047.8-201ENST00000456455 284 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 Y_RNA.691-201ENST00000516611 103 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 AC139792.2-201ENST00000624218 587 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 AC027279.3-201ENST00000625055 122 ntBASIC0.73□□□□□ -2.29
UPK3AO75631 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
UPK3AO75631 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
UPK3AO75631 Y_RNA.101-201ENST00000363154 102 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 RNY3P11-201ENST00000364153 102 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 Y_RNA.279-201ENST00000364763 95 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 RNU6-890P-201ENST00000384121 107 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 SNORD116-13-201ENST00000384408 92 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 MIR452-201ENST00000385020 85 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 SNORA75.6-201ENST00000391318 127 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 PDCL2P1-201ENST00000419302 352 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 FABP5P4-201ENST00000437203 171 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 AC093019.1-201ENST00000443135 252 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.72□□□□□ -2.29
UPK3AO75631 FCF1P4-201ENST00000448326 183 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 RPS20P10-201ENST00000451209 253 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 RNU7-21P-201ENST00000459430 62 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.72□□□□□ -2.29
UPK3AO75631 RNU7-4P-201ENST00000516961 62 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.72□□□□□ -2.29
UPK3AO75631 TPTEP1-208ENST00000636884 213 ntBASIC0.72□□□□□ -2.29
UPK3AO75631 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.72□□□□□ -2.29
UPK3AO75631 RNU6-1188P-201ENST00000363795 107 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 RNU6-324P-201ENST00000363957 106 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 RNY1-201ENST00000364228 113 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 MIR516B2-201ENST00000385190 85 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 RNU6-192P-201ENST00000391253 100 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 RNU2-54P-201ENST00000410299 190 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 Y_RNA.605-201ENST00000410577 105 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 MLLT10P1-201ENST00000418346 262 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 RPL30P15-201ENST00000457129 321 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 snoU13.25-201ENST00000458945 104 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 MIR5690-201ENST00000583739 73 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 MIR3192-201ENST00000584920 77 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 AC005176.2-201ENST00000596933 147 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 PRELID3BP2-201ENST00000605362 201 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 AL391903.3-201ENST00000612158 163 ntBASIC0.71□□□□□ -2.3
UPK3AO75631 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
UPK3AO75631 AC240442.1-201ENST00000616055 283 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms