Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC113410.1-201ENST00000505029 247 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 RNU7-41P-201ENST00000515917 61 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 AC018448.1-201ENST00000552843 316 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 AC090617.3-201ENST00000573670 475 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 AC100812.1-201ENST00000607622 580 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 RNU6-94P-201ENST00000607728 107 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 MIR6128-201ENST00000615528 109 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 AC007014.2-201ENST00000615581 479 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 RNU6-1145P-201ENST00000384246 107 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 SNORD116-1-201ENST00000384335 95 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 Y_RNA.498-201ENST00000384460 102 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 Y_RNA.557-201ENST00000384680 107 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 MIR1265-201ENST00000408444 86 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 RNU6-1148P-201ENST00000410992 104 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 Y_RNA.621-201ENST00000411065 96 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.46□□□□□ -2.34
NPHP4O75161 DLGAP5P1-201ENST00000430307 464 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.46□□□□□ -2.34
NPHP4O75161 SEPT14P17-201ENST00000617978 177 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 MIR1321-201ENST00000637766 79 ntBASIC0.46□□□□□ -2.34
NPHP4O75161 RNU6-874P-201ENST00000362390 105 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 RNY1P16-201ENST00000363063 111 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 RNU6-879P-201ENST00000364328 108 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 AL390729.2-201ENST00000416137 156 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.45□□□□□ -2.34
NPHP4O75161 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 MTATP6P17-201ENST00000431030 672 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 RPL23AP50-201ENST00000434149 455 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.45□□□□□ -2.34
NPHP4O75161 SNORA70.12-201ENST00000516084 153 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 RNU6-314P-201ENST00000516574 104 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 AP003716.2-201ENST00000528260 108 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.45□□□□□ -2.34
NPHP4O75161 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
NPHP4O75161 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.45□□□□□ -2.34
NPHP4O75161 Y_RNA.41-201ENST00000362646 102 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 RNU6-596P-201ENST00000365395 98 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 RNU6-110P-201ENST00000384508 104 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 RNU6-831P-201ENST00000384548 107 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 MIR520C-201ENST00000385005 87 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 MIR520G-201ENST00000385064 90 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 MIR190B-201ENST00000401119 79 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 MIR873-201ENST00000401120 77 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 AL354751.2-201ENST00000415471 210 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.44□□□□□ -2.34
NPHP4O75161 AC093019.1-201ENST00000443135 252 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 CYCTP-201ENST00000504253 315 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 RNU1-54P-201ENST00000517181 120 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 AC026407.1-201ENST00000518369 204 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
NPHP4O75161 AC104260.1-201ENST00000616660 539 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 AL591926.4-201ENST00000616895 298 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.44□□□□□ -2.34
NPHP4O75161 RNU6-864P-201ENST00000516256 108 ntBASIC0.43□□□□□ -2.34
NPHP4O75161 MIR5589-201ENST00000579442 60 ntBASIC0.43□□□□□ -2.34
NPHP4O75161 AC103591.3-201ENST00000608684 209 ntBASIC0.43□□□□□ -2.34
NPHP4O75161 AC100810.6-201ENST00000638068 285 ntBASIC0.43□□□□□ -2.34
NPHP4O75161 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 Y_RNA.490-201ENST00000384413 102 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 RNA5SP475-201ENST00000410568 110 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 MTND1P1-201ENST00000445453 368 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 ELOCP24-201ENST00000456370 334 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 U7.7-201ENST00000459276 60 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 RNU6-625P-201ENST00000459412 107 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 AC098869.1-201ENST00000481627 292 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.42□□□□□ -2.34
NPHP4O75161 RNU6-566P-201ENST00000516790 107 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 SNORA18.7-201ENST00000516910 131 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 RNU6-1314P-201ENST00000517139 104 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.42□□□□□ -2.34
NPHP4O75161 MIR5190-201ENST00000581537 80 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 AC005014.2-201ENST00000607795 599 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 AC027279.3-201ENST00000625055 122 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 MIR3674-201ENST00000636576 68 ntBASIC0.42□□□□□ -2.34
NPHP4O75161 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
NPHP4O75161 RNY1P8-201ENST00000383970 114 ntBASIC0.41□□□□□ -2.34
NPHP4O75161 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.41□□□□□ -2.34
NPHP4O75161 MLLT10P1-201ENST00000418346 262 ntBASIC0.41□□□□□ -2.34
NPHP4O75161 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.41□□□□□ -2.34
NPHP4O75161 AL353997.1-201ENST00000432936 108 ntBASIC0.41□□□□□ -2.34
NPHP4O75161 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.41□□□□□ -2.34
NPHP4O75161 SNORA74.3-201ENST00000517108 154 ntBASIC0.41□□□□□ -2.34
NPHP4O75161 MTND4LP26-201ENST00000518144 282 ntBASIC0.41□□□□□ -2.34
NPHP4O75161 AL358944.1-201ENST00000528537 144 ntBASIC0.41□□□□□ -2.34
NPHP4O75161 AC011195.1-201ENST00000578177 177 ntBASIC0.41□□□□□ -2.34
NPHP4O75161 MIR3684-201ENST00000579779 74 ntBASIC0.41□□□□□ -2.34
NPHP4O75161 AC005828.6-201ENST00000606610 232 ntBASIC0.41□□□□□ -2.34
NPHP4O75161 AC245008.1-201ENST00000608123 476 ntBASIC0.41□□□□□ -2.34
NPHP4O75161 RNU6-654P-201ENST00000364373 107 ntBASIC0.4□□□□□ -2.34
NPHP4O75161 Y_RNA.358-201ENST00000365491 99 ntBASIC0.4□□□□□ -2.34
NPHP4O75161 Y_RNA.364-201ENST00000365532 101 ntBASIC0.4□□□□□ -2.34
NPHP4O75161 RNU6-318P-201ENST00000384283 103 ntBASIC0.4□□□□□ -2.34
NPHP4O75161 MIR452-201ENST00000385020 85 ntBASIC0.4□□□□□ -2.34
NPHP4O75161 RNU2-16P-201ENST00000410712 136 ntBASIC0.4□□□□□ -2.34
NPHP4O75161 AC092423.1-201ENST00000430165 186 ntBASIC0.4□□□□□ -2.34
NPHP4O75161 AC074133.1-201ENST00000515696 183 ntBASIC0.4□□□□□ -2.34
NPHP4O75161 SNORA40.9-201ENST00000515895 93 ntBASIC0.4□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms