Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AP001485.1-201ENST00000604799 199 ntBASIC1.35□□□□□ -2.19
SNX3O60493 MIR6845-201ENST00000613182 61 ntBASIC1.35□□□□□ -2.19
SNX3O60493 AC106754.2-201ENST00000623006 233 ntBASIC1.35□□□□□ -2.19
SNX3O60493 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.35□□□□□ -2.19
SNX3O60493 MIRLET7C-201ENST00000362160 84 ntBASIC1.34□□□□□ -2.19
SNX3O60493 Y_RNA.183-201ENST00000363882 113 ntBASIC1.34□□□□□ -2.19
SNX3O60493 Y_RNA.310-201ENST00000365063 113 ntBASIC1.34□□□□□ -2.19
SNX3O60493 Y_RNA.527-201ENST00000384573 102 ntBASIC1.34□□□□□ -2.19
SNX3O60493 SNRPGP13-201ENST00000442212 177 ntBASIC1.34□□□□□ -2.19
SNX3O60493 AC005972.2-201ENST00000604690 348 ntBASIC1.34□□□□□ -2.19
SNX3O60493 SNORD113-5-201ENST00000607261 78 ntBASIC1.34□□□□□ -2.19
SNX3O60493 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
SNX3O60493 MIR376A1-201ENST00000616574 68 ntBASIC1.34□□□□□ -2.19
SNX3O60493 AL121890.5-201ENST00000620848 304 ntBASIC1.34□□□□□ -2.19
SNX3O60493 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.34□□□□□ -2.19
SNX3O60493 Y_RNA.158-201ENST00000363651 101 ntBASIC1.33□□□□□ -2.2
SNX3O60493 Y_RNA.341-201ENST00000365341 102 ntBASIC1.33□□□□□ -2.2
SNX3O60493 Y_RNA.383-201ENST00000383855 97 ntBASIC1.33□□□□□ -2.2
SNX3O60493 MIR504-201ENST00000385065 83 ntBASIC1.33□□□□□ -2.2
SNX3O60493 MIR23A-201ENST00000385245 73 ntBASIC1.33□□□□□ -2.2
SNX3O60493 SNX2P2-201ENST00000424553 323 ntBASIC1.33□□□□□ -2.2
SNX3O60493 AL135790.2-201ENST00000437701 267 ntBASIC1.33□□□□□ -2.2
SNX3O60493 MTCYBP6-201ENST00000441810 138 ntBASIC1.33□□□□□ -2.2
SNX3O60493 AC093850.1-201ENST00000454121 251 ntBASIC1.33□□□□□ -2.2
SNX3O60493 SEPT14P8-201ENST00000508026 178 ntBASIC1.33□□□□□ -2.2
SNX3O60493 RNU6-295P-201ENST00000516901 104 ntBASIC1.33□□□□□ -2.2
SNX3O60493 RNU6-1116P-201ENST00000517269 99 ntBASIC1.33□□□□□ -2.2
SNX3O60493 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.33□□□□□ -2.2
SNX3O60493 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
SNX3O60493 AL356055.1-201ENST00000602528 446 ntBASIC1.33□□□□□ -2.2
SNX3O60493 AL078604.3-201ENST00000615580 211 ntBASIC1.33□□□□□ -2.2
SNX3O60493 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.33□□□□□ -2.2
SNX3O60493 Y_RNA.11-201ENST00000362375 109 ntBASIC1.32□□□□□ -2.2
SNX3O60493 Y_RNA.105-201ENST00000363182 111 ntBASIC1.32□□□□□ -2.2
SNX3O60493 SNORD113-8-201ENST00000363497 74 ntBASIC1.32□□□□□ -2.2
SNX3O60493 RNU6-457P-201ENST00000363999 107 ntBASIC1.32□□□□□ -2.2
SNX3O60493 RNU4-76P-201ENST00000364509 141 ntBASIC1.32□□□□□ -2.2
SNX3O60493 Y_RNA.368-201ENST00000365547 113 ntBASIC1.32□□□□□ -2.2
SNX3O60493 RNU6-102P-201ENST00000384485 104 ntBASIC1.32□□□□□ -2.2
SNX3O60493 RNU6-1065P-201ENST00000384513 106 ntBASIC1.32□□□□□ -2.2
SNX3O60493 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
SNX3O60493 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.32□□□□□ -2.2
SNX3O60493 POLR2KP2-201ENST00000438155 177 ntBASIC1.32□□□□□ -2.2
SNX3O60493 HMGN1P10-201ENST00000474557 553 ntBASIC1.32□□□□□ -2.2
SNX3O60493 AC092991.1-201ENST00000477176 376 ntBASIC1.32□□□□□ -2.2
SNX3O60493 RNU7-12P-201ENST00000516030 62 ntBASIC1.32□□□□□ -2.2
SNX3O60493 MIR4680-201ENST00000580906 66 ntBASIC1.32□□□□□ -2.2
SNX3O60493 AC068647.2-201ENST00000637380 353 ntBASIC1.32□□□□□ -2.2
SNX3O60493 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SNX3O60493 SNORD68-201ENST00000363214 84 ntBASIC1.31□□□□□ -2.2
SNX3O60493 Y_RNA.202-201ENST00000364083 110 ntBASIC1.31□□□□□ -2.2
SNX3O60493 Y_RNA.380-201ENST00000365663 111 ntBASIC1.31□□□□□ -2.2
SNX3O60493 Y_RNA.455-201ENST00000384230 98 ntBASIC1.31□□□□□ -2.2
SNX3O60493 Y_RNA.456-201ENST00000384232 111 ntBASIC1.31□□□□□ -2.2
SNX3O60493 SNORD115-46-201ENST00000390982 71 ntBASIC1.31□□□□□ -2.2
SNX3O60493 SNORA26.9-201ENST00000391322 122 ntBASIC1.31□□□□□ -2.2
SNX3O60493 RNU6-121P-201ENST00000410525 99 ntBASIC1.31□□□□□ -2.2
SNX3O60493 Y_RNA.602-201ENST00000410535 92 ntBASIC1.31□□□□□ -2.2
SNX3O60493 RPL30P13-201ENST00000418873 348 ntBASIC1.31□□□□□ -2.2
SNX3O60493 AC024067.1-201ENST00000426199 223 ntBASIC1.31□□□□□ -2.2
SNX3O60493 RNU6-1137P-201ENST00000517073 99 ntBASIC1.31□□□□□ -2.2
SNX3O60493 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
SNX3O60493 AC113195.1-201ENST00000579952 141 ntBASIC1.31□□□□□ -2.2
SNX3O60493 MIR3683-201ENST00000580847 82 ntBASIC1.31□□□□□ -2.2
SNX3O60493 MIR3945-201ENST00000581853 98 ntBASIC1.31□□□□□ -2.2
SNX3O60493 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.31□□□□□ -2.2
SNX3O60493 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.31□□□□□ -2.2
SNX3O60493 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.31□□□□□ -2.2
SNX3O60493 AL591926.4-201ENST00000616895 298 ntBASIC1.31□□□□□ -2.2
SNX3O60493 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.31□□□□□ -2.2
SNX3O60493 RNU6-199P-201ENST00000362954 107 ntBASIC1.3□□□□□ -2.2
SNX3O60493 RNU4-80P-201ENST00000363200 141 ntBASIC1.3□□□□□ -2.2
SNX3O60493 Y_RNA.222-201ENST00000364264 102 ntBASIC1.3□□□□□ -2.2
SNX3O60493 AC117470.1-201ENST00000381974 330 ntBASIC1.3□□□□□ -2.2
SNX3O60493 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.3□□□□□ -2.2
SNX3O60493 HSPE1P25-201ENST00000455484 251 ntBASIC1.3□□□□□ -2.2
SNX3O60493 snoU13.15-201ENST00000459407 104 ntBASIC1.3□□□□□ -2.2
SNX3O60493 RPL39P38-201ENST00000467018 153 ntBASIC1.3□□□□□ -2.2
SNX3O60493 RNU6-496P-201ENST00000516145 99 ntBASIC1.3□□□□□ -2.2
SNX3O60493 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.3□□□□□ -2.2
SNX3O60493 AC131281.1-201ENST00000522984 164 ntBASIC1.3□□□□□ -2.2
SNX3O60493 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
SNX3O60493 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.3□□□□□ -2.2
SNX3O60493 AL512310.8-201ENST00000550183 120 ntBASIC1.3□□□□□ -2.2
SNX3O60493 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNX3O60493 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.29□□□□□ -2.2
SNX3O60493 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SNX3O60493 RNU6-1323P-201ENST00000384025 107 ntBASIC1.29□□□□□ -2.2
SNX3O60493 SNORA72-201ENST00000384339 132 ntBASIC1.29□□□□□ -2.2
SNX3O60493 ELOCP20-201ENST00000422460 345 ntBASIC1.29□□□□□ -2.2
SNX3O60493 AC005534.2-201ENST00000431047 433 ntBASIC1.29□□□□□ -2.2
SNX3O60493 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.29□□□□□ -2.2
SNX3O60493 RN7SKP179-201ENST00000516126 217 ntBASIC1.29□□□□□ -2.2
SNX3O60493 SNORA25.15-201ENST00000516487 89 ntBASIC1.29□□□□□ -2.2
SNX3O60493 AC044792.1-201ENST00000593294 196 ntBASIC1.29□□□□□ -2.2
SNX3O60493 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SNX3O60493 Y_RNA.214-201ENST00000364201 112 ntBASIC1.28□□□□□ -2.2
SNX3O60493 Y_RNA.253-201ENST00000364562 112 ntBASIC1.28□□□□□ -2.2
SNX3O60493 U8.7-201ENST00000364940 136 ntBASIC1.28□□□□□ -2.2
SNX3O60493 SNORA33.2-201ENST00000365413 134 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms