Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RPL23AP63-201ENST00000498752 471 ntBASIC2.22□□□□□ -2.05
PRPF3O43395 RNU6-191P-201ENST00000516295 94 ntBASIC2.22□□□□□ -2.05
PRPF3O43395 Y_RNA.676-201ENST00000516393 96 ntBASIC2.22□□□□□ -2.05
PRPF3O43395 AL512605.2-201ENST00000592972 256 ntBASIC2.22□□□□□ -2.05
PRPF3O43395 AC005972.2-201ENST00000604690 348 ntBASIC2.22□□□□□ -2.05
PRPF3O43395 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF3O43395 RNU6-414P-201ENST00000363705 104 ntBASIC2.21□□□□□ -2.06
PRPF3O43395 Y_RNA.172-201ENST00000363765 102 ntBASIC2.21□□□□□ -2.06
PRPF3O43395 Y_RNA.518-201ENST00000384552 113 ntBASIC2.21□□□□□ -2.06
PRPF3O43395 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.21□□□□□ -2.06
PRPF3O43395 HSPE1P9-201ENST00000440046 311 ntBASIC2.21□□□□□ -2.06
PRPF3O43395 AC091959.1-201ENST00000495857 238 ntBASIC2.21□□□□□ -2.06
PRPF3O43395 RNU6-548P-201ENST00000517083 115 ntBASIC2.21□□□□□ -2.06
PRPF3O43395 MIR3198-2-201ENST00000577868 80 ntBASIC2.21□□□□□ -2.06
PRPF3O43395 AC091178.2-201ENST00000584401 117 ntBASIC2.21□□□□□ -2.06
PRPF3O43395 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.21□□□□□ -2.06
PRPF3O43395 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.21□□□□□ -2.06
PRPF3O43395 RNU6-1323P-201ENST00000384025 107 ntBASIC2.2□□□□□ -2.06
PRPF3O43395 SNORD116-13-201ENST00000384408 92 ntBASIC2.2□□□□□ -2.06
PRPF3O43395 MIR1289-2-201ENST00000408360 111 ntBASIC2.2□□□□□ -2.06
PRPF3O43395 SNORD127-201ENST00000458892 86 ntBASIC2.2□□□□□ -2.06
PRPF3O43395 RPL23AP42-201ENST00000471152 471 ntBASIC2.2□□□□□ -2.06
PRPF3O43395 Y_RNA.668-201ENST00000516233 93 ntBASIC2.2□□□□□ -2.06
PRPF3O43395 MIR4709-201ENST00000577272 72 ntBASIC2.2□□□□□ -2.06
PRPF3O43395 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.2□□□□□ -2.06
PRPF3O43395 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
PRPF3O43395 Y_RNA.193-201ENST00000363979 102 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 Y_RNA.310-201ENST00000365063 113 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 RNU6-136P-201ENST00000384663 107 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 AL034345.1-201ENST00000407768 123 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 RNA5SP511-201ENST00000410487 115 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 RNU2-38P-201ENST00000410856 79 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 RPL30P13-201ENST00000418873 348 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 AL135790.2-201ENST00000437701 267 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 RPS27P1-201ENST00000450552 247 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 RPS20P10-201ENST00000451209 253 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 AC136628.3-201ENST00000521868 290 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 AC004817.2-201ENST00000561794 651 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 AC022217.4-201ENST00000604389 163 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 AC004832.4-201ENST00000608952 331 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.19□□□□□ -2.06
PRPF3O43395 AL078604.3-201ENST00000615580 211 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
PRPF3O43395 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PRPF3O43395 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
PRPF3O43395 AL603825.1-201ENST00000438481 80 ntBASIC2.18□□□□□ -2.06
PRPF3O43395 RNA5SP182-201ENST00000516064 82 ntBASIC2.18□□□□□ -2.06
PRPF3O43395 RNA5SP458-201ENST00000516188 119 ntBASIC2.18□□□□□ -2.06
PRPF3O43395 RNU2-56P-201ENST00000516826 190 ntBASIC2.18□□□□□ -2.06
PRPF3O43395 RNA5SP437-201ENST00000517249 129 ntBASIC2.18□□□□□ -2.06
PRPF3O43395 AC015720.1-201ENST00000565251 277 ntBASIC2.18□□□□□ -2.06
PRPF3O43395 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
PRPF3O43395 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.18□□□□□ -2.06
PRPF3O43395 AC100821.1-201ENST00000523153 2479 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.17□□□□□ -2.06
PRPF3O43395 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PRPF3O43395 MIR764-201ENST00000390811 85 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 RNA5SP482-201ENST00000391269 118 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 RNU6-1132P-201ENST00000459214 107 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 AC107393.1-201ENST00000512403 346 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 SNORA27.4-201ENST00000516650 95 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 AC110588.1-201ENST00000559699 137 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 AC012433.1-201ENST00000588916 398 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 AC062037.2-201ENST00000610137 73 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 MIR8074-201ENST00000615081 81 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 AL353997.5-201ENST00000618886 171 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 MIR8054-201ENST00000620877 86 ntBASIC2.17□□□□□ -2.06
PRPF3O43395 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
PRPF3O43395 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PRPF3O43395 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PRPF3O43395 WWP1P1-201ENST00000466609 2769 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 Y_RNA.14-201ENST00000362415 103 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 Y_RNA.44-201ENST00000362676 108 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 SNORA72-201ENST00000384339 132 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 MIR30A-201ENST00000385092 71 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PRPF3O43395 RNU6-440P-201ENST00000390882 105 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 AC091021.1-201ENST00000468051 388 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 RNU6-1096P-201ENST00000517089 102 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.16□□□□□ -2.06
PRPF3O43395 U2.14-201ENST00000615943 113 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 AC068647.2-201ENST00000637380 353 ntBASIC2.16□□□□□ -2.06
PRPF3O43395 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PRPF3O43395 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
PRPF3O43395 RNU6-801P-201ENST00000364087 105 ntBASIC2.15□□□□□ -2.07
PRPF3O43395 RNU6-662P-201ENST00000384253 104 ntBASIC2.15□□□□□ -2.07
PRPF3O43395 RNA5SP109-201ENST00000391010 116 ntBASIC2.15□□□□□ -2.07
PRPF3O43395 HSPE1P21-201ENST00000438283 308 ntBASIC2.15□□□□□ -2.07
PRPF3O43395 JTBP1-201ENST00000441314 247 ntBASIC2.15□□□□□ -2.07
PRPF3O43395 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.15□□□□□ -2.07
PRPF3O43395 RPL39P38-201ENST00000467018 153 ntBASIC2.15□□□□□ -2.07
PRPF3O43395 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.15□□□□□ -2.07
PRPF3O43395 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.14□□□□□ -2.07
PRPF3O43395 UBE2WP1-201ENST00000362030 340 ntBASIC2.14□□□□□ -2.07
PRPF3O43395 RNU6-1123P-201ENST00000362347 106 ntBASIC2.14□□□□□ -2.07
PRPF3O43395 Y_RNA.352-201ENST00000365439 102 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms