Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 SNORD113-7-201ENST00000363762 77 ntBASIC-0.57□□□□□ -2.5
HMGB3O15347 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.57□□□□□ -2.5
HMGB3O15347 RNU6-248P-201ENST00000410720 107 ntBASIC-0.57□□□□□ -2.5
HMGB3O15347 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.57□□□□□ -2.5
HMGB3O15347 MTND4LP16-201ENST00000440828 295 ntBASIC-0.57□□□□□ -2.5
HMGB3O15347 MIR18B-201ENST00000454574 71 ntBASIC-0.57□□□□□ -2.5
HMGB3O15347 RNU7-63P-201ENST00000459054 62 ntBASIC-0.57□□□□□ -2.5
HMGB3O15347 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.57□□□□□ -2.5
HMGB3O15347 MTND2P14-201ENST00000482139 351 ntBASIC-0.57□□□□□ -2.5
HMGB3O15347 RNU7-129P-201ENST00000516128 62 ntBASIC-0.57□□□□□ -2.5
HMGB3O15347 AC092447.9-201ENST00000603395 144 ntBASIC-0.57□□□□□ -2.5
HMGB3O15347 SNORD38B-202ENST00000625943 69 ntBASIC-0.57□□□□□ -2.5
HMGB3O15347 SNORD114-31-201ENST00000363219 75 ntBASIC-0.58□□□□□ -2.5
HMGB3O15347 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.58□□□□□ -2.5
HMGB3O15347 SNORA1.1-201ENST00000364671 133 ntBASIC-0.58□□□□□ -2.5
HMGB3O15347 RNU6-187P-201ENST00000384139 106 ntBASIC-0.58□□□□□ -2.5
HMGB3O15347 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.58□□□□□ -2.5
HMGB3O15347 RNU7-62P-201ENST00000458856 62 ntBASIC-0.58□□□□□ -2.5
HMGB3O15347 SNORA18.4-201ENST00000516440 124 ntBASIC-0.58□□□□□ -2.5
HMGB3O15347 AC072046.2-201ENST00000618366 268 ntBASIC-0.58□□□□□ -2.5
HMGB3O15347 MIR6828-201ENST00000636181 60 ntBASIC-0.58□□□□□ -2.5
HMGB3O15347 SNORA26.5-201ENST00000391215 123 ntBASIC-0.59□□□□□ -2.5
HMGB3O15347 MTCO2P27-201ENST00000420740 428 ntBASIC-0.59□□□□□ -2.5
HMGB3O15347 SNRPGP10-201ENST00000432323 225 ntBASIC-0.59□□□□□ -2.5
HMGB3O15347 AL358934.1-201ENST00000432346 324 ntBASIC-0.59□□□□□ -2.5
HMGB3O15347 TRBVB-201ENST00000477100 408 ntBASIC-0.59□□□□□ -2.5
HMGB3O15347 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.59□□□□□ -2.5
HMGB3O15347 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.59□□□□□ -2.5
HMGB3O15347 SNORA19.2-201ENST00000516013 114 ntBASIC-0.59□□□□□ -2.5
HMGB3O15347 RNU7-156P-201ENST00000517214 74 ntBASIC-0.59□□□□□ -2.5
HMGB3O15347 AL118558.2-201ENST00000556294 238 ntBASIC-0.59□□□□□ -2.5
HMGB3O15347 MIR4791-201ENST00000607666 84 ntBASIC-0.59□□□□□ -2.5
HMGB3O15347 RNU4-21P-201ENST00000362802 126 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 RNU6-161P-201ENST00000363051 106 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 SNORA63C-201ENST00000364578 129 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 MIR329-2-201ENST00000385029 84 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 RNU6-131P-201ENST00000391144 107 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 U8.17-201ENST00000391292 132 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.6□□□□□ -2.51
HMGB3O15347 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.6□□□□□ -2.51
HMGB3O15347 AL512326.2-201ENST00000426359 151 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.6□□□□□ -2.51
HMGB3O15347 AC091959.1-201ENST00000495857 238 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 AC022616.4-201ENST00000522985 181 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.6□□□□□ -2.51
HMGB3O15347 AC005730.3-201ENST00000583067 366 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 MIR8064-201ENST00000612863 90 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 MIR499B-201ENST00000636498 73 ntBASIC-0.6□□□□□ -2.51
HMGB3O15347 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 RNU6-454P-201ENST00000364292 107 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 SNORD38C-201ENST00000384381 69 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
HMGB3O15347 MTND1P17-201ENST00000448961 204 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 RNU7-187P-201ENST00000458985 68 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 RNU7-185P-201ENST00000459215 60 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 RNU2-13P-201ENST00000515909 113 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 RNU6-311P-201ENST00000516224 102 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 Z94722.1-201ENST00000604328 474 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 Pinc.1-201ENST00000616452 154 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 AC073534.2-201ENST00000620377 381 ntBASIC-0.61□□□□□ -2.51
HMGB3O15347 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.62□□□□□ -2.51
HMGB3O15347 SNORD114-12-201ENST00000365400 75 ntBASIC-0.62□□□□□ -2.51
HMGB3O15347 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.62□□□□□ -2.51
HMGB3O15347 SNORA26-201ENST00000391286 122 ntBASIC-0.62□□□□□ -2.51
HMGB3O15347 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.62□□□□□ -2.51
HMGB3O15347 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.62□□□□□ -2.51
HMGB3O15347 MIR5696-201ENST00000578474 85 ntBASIC-0.62□□□□□ -2.51
HMGB3O15347 MIR3124-201ENST00000582636 67 ntBASIC-0.62□□□□□ -2.51
HMGB3O15347 FAM157A-202ENST00000615155 405 ntBASIC-0.62□□□□□ -2.51
HMGB3O15347 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.62□□□□□ -2.51
HMGB3O15347 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.62□□□□□ -2.51
HMGB3O15347 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.62□□□□□ -2.51
HMGB3O15347 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 RNU6-923P-201ENST00000364753 107 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 RNU6-790P-201ENST00000384479 105 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 SNORA32.3-201ENST00000384772 121 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 MIR613-201ENST00000385248 95 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 MTCO2P8-201ENST00000412213 658 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 UQCRBP2-201ENST00000447827 297 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 U8.19-201ENST00000459095 133 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 U8.22-201ENST00000459141 133 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 RPL39P34-201ENST00000477141 156 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.63□□□□□ -2.51
HMGB3O15347 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 RNU6-469P-201ENST00000516253 101 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 AC093023.1-201ENST00000547375 507 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 AL354950.2-201ENST00000617939 290 ntBASIC-0.63□□□□□ -2.51
HMGB3O15347 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.64□□□□□ -2.51
HMGB3O15347 MIR329-1-201ENST00000385028 80 ntBASIC-0.64□□□□□ -2.51
HMGB3O15347 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.64□□□□□ -2.51
HMGB3O15347 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.64□□□□□ -2.51
HMGB3O15347 AC090844.1-201ENST00000422019 156 ntBASIC-0.64□□□□□ -2.51
HMGB3O15347 CYCSP46-201ENST00000423569 204 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms