Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 SNORA40.6-201ENST00000391153 128 ntBASIC1.63□□□□□ -2.15
NPHP1O15259 RNA5SP511-201ENST00000410487 115 ntBASIC1.63□□□□□ -2.15
NPHP1O15259 AL354751.2-201ENST00000415471 210 ntBASIC1.63□□□□□ -2.15
NPHP1O15259 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.63□□□□□ -2.15
NPHP1O15259 AL162725.1-201ENST00000435405 301 ntBASIC1.63□□□□□ -2.15
NPHP1O15259 AC233266.1-201ENST00000454518 96 ntBASIC1.63□□□□□ -2.15
NPHP1O15259 MIR4795-201ENST00000584182 89 ntBASIC1.63□□□□□ -2.15
NPHP1O15259 AL513534.2-201ENST00000603836 250 ntBASIC1.63□□□□□ -2.15
NPHP1O15259 AC242852.1-201ENST00000612151 96 ntBASIC1.63□□□□□ -2.15
NPHP1O15259 AC244015.1-201ENST00000622301 99 ntBASIC1.63□□□□□ -2.15
NPHP1O15259 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
NPHP1O15259 MIRLET7C-201ENST00000362160 84 ntBASIC1.62□□□□□ -2.15
NPHP1O15259 RNU4-79P-201ENST00000362764 141 ntBASIC1.62□□□□□ -2.15
NPHP1O15259 RNU6-199P-201ENST00000362954 107 ntBASIC1.62□□□□□ -2.15
NPHP1O15259 MIR653-201ENST00000385279 96 ntBASIC1.62□□□□□ -2.15
NPHP1O15259 AL049830.1-201ENST00000468034 425 ntBASIC1.62□□□□□ -2.15
NPHP1O15259 RNU6-966P-201ENST00000516479 104 ntBASIC1.62□□□□□ -2.15
NPHP1O15259 AL117336.2-201ENST00000602435 335 ntBASIC1.62□□□□□ -2.15
NPHP1O15259 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.62□□□□□ -2.15
NPHP1O15259 MIR7974-201ENST00000615835 79 ntBASIC1.62□□□□□ -2.15
NPHP1O15259 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
NPHP1O15259 MIR96-201ENST00000362288 78 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 RNY1-201ENST00000364228 113 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 Y_RNA.230-201ENST00000364348 109 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 Y_RNA.446-201ENST00000384178 104 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 RNU2-61P-201ENST00000411069 191 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 Z98949.2-201ENST00000440996 144 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 RNU6-155P-201ENST00000516347 100 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 RNU6-922P-201ENST00000516753 99 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 MIR8065-201ENST00000620577 100 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 AC104985.2-201ENST00000620598 500 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 AL008636.1-201ENST00000625038 1018 ntBASIC1.61□□□□□ -2.15
NPHP1O15259 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
NPHP1O15259 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
NPHP1O15259 RNA5SP327-201ENST00000362494 101 ntBASIC1.6□□□□□ -2.15
NPHP1O15259 RNU4-41P-201ENST00000364426 143 ntBASIC1.6□□□□□ -2.15
NPHP1O15259 SNORD116-13-201ENST00000384408 92 ntBASIC1.6□□□□□ -2.15
NPHP1O15259 DYNLT3P2-201ENST00000442517 295 ntBASIC1.6□□□□□ -2.15
NPHP1O15259 RPS4XP11-201ENST00000446897 772 ntBASIC1.6□□□□□ -2.15
NPHP1O15259 Y_RNA.252-201ENST00000364556 101 ntBASIC1.59□□□□□ -2.15
NPHP1O15259 MIR613-201ENST00000385248 95 ntBASIC1.59□□□□□ -2.15
NPHP1O15259 RPEP5-201ENST00000441137 268 ntBASIC1.59□□□□□ -2.15
NPHP1O15259 AC093850.1-201ENST00000454121 251 ntBASIC1.59□□□□□ -2.15
NPHP1O15259 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.59□□□□□ -2.15
NPHP1O15259 RNU7-12P-201ENST00000516030 62 ntBASIC1.59□□□□□ -2.15
NPHP1O15259 RNU6-436P-201ENST00000516171 114 ntBASIC1.59□□□□□ -2.15
NPHP1O15259 AC019288.1-201ENST00000557918 224 ntBASIC1.59□□□□□ -2.15
NPHP1O15259 MIR3660-201ENST00000584845 100 ntBASIC1.59□□□□□ -2.15
NPHP1O15259 AC092447.9-201ENST00000603395 144 ntBASIC1.59□□□□□ -2.15
NPHP1O15259 AC022441.3-201ENST00000605737 136 ntBASIC1.59□□□□□ -2.15
NPHP1O15259 Y_RNA.5-201ENST00000362334 102 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 RNU6-324P-201ENST00000363957 106 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 Y_RNA.315-201ENST00000365117 102 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 SNORD41-201ENST00000386967 70 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 Y_RNA.579-201ENST00000390939 94 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 AC093852.1-201ENST00000503587 266 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.58□□□□□ -2.16
NPHP1O15259 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 RNU6-917P-201ENST00000516294 104 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.58□□□□□ -2.16
NPHP1O15259 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 AC090049.2-201ENST00000550377 109 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.58□□□□□ -2.16
NPHP1O15259 GHRLOS.1-201ENST00000610995 70 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 AC068647.2-201ENST00000637380 353 ntBASIC1.58□□□□□ -2.16
NPHP1O15259 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.57□□□□□ -2.16
NPHP1O15259 RNU1-115P-201ENST00000365329 160 ntBASIC1.57□□□□□ -2.16
NPHP1O15259 Y_RNA.570-201ENST00000384750 101 ntBASIC1.57□□□□□ -2.16
NPHP1O15259 MIR7-2-201ENST00000384970 110 ntBASIC1.57□□□□□ -2.16
NPHP1O15259 RPS29P1-201ENST00000465274 159 ntBASIC1.57□□□□□ -2.16
NPHP1O15259 RNU4-77P-201ENST00000516692 156 ntBASIC1.57□□□□□ -2.16
NPHP1O15259 AC008269.2-201ENST00000561915 1105 ntBASIC1.57□□□□□ -2.16
NPHP1O15259 MIR5188-201ENST00000583467 113 ntBASIC1.57□□□□□ -2.16
NPHP1O15259 AL133255.1-201ENST00000606374 441 ntBASIC1.57□□□□□ -2.16
NPHP1O15259 AC010205.1-201ENST00000616668 449 ntBASIC1.57□□□□□ -2.16
NPHP1O15259 Y_RNA.172-201ENST00000363765 102 ntBASIC1.56□□□□□ -2.16
NPHP1O15259 SNORA2.2-201ENST00000365473 135 ntBASIC1.56□□□□□ -2.16
NPHP1O15259 Y_RNA.661-201ENST00000516003 99 ntBASIC1.56□□□□□ -2.16
NPHP1O15259 RNU6-976P-201ENST00000516086 111 ntBASIC1.56□□□□□ -2.16
NPHP1O15259 RN7SKP295-201ENST00000517264 153 ntBASIC1.56□□□□□ -2.16
NPHP1O15259 MIR4423-201ENST00000580922 80 ntBASIC1.56□□□□□ -2.16
NPHP1O15259 FAM106DP-201ENST00000586416 501 ntBASIC1.56□□□□□ -2.16
NPHP1O15259 AC004832.4-201ENST00000608952 331 ntBASIC1.56□□□□□ -2.16
NPHP1O15259 AL138825.1-201ENST00000618587 192 ntBASIC1.56□□□□□ -2.16
NPHP1O15259 MIR6515-201ENST00000619843 57 ntBASIC1.56□□□□□ -2.16
NPHP1O15259 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.56□□□□□ -2.16
NPHP1O15259 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.56□□□□□ -2.16
NPHP1O15259 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NPHP1O15259 Y_RNA.39-201ENST00000362620 98 ntBASIC1.55□□□□□ -2.16
NPHP1O15259 RNU6-867P-201ENST00000364956 107 ntBASIC1.55□□□□□ -2.16
NPHP1O15259 RNU6-1175P-201ENST00000365200 107 ntBASIC1.55□□□□□ -2.16
NPHP1O15259 RNU6-1080P-201ENST00000383982 107 ntBASIC1.55□□□□□ -2.16
NPHP1O15259 Y_RNA.509-201ENST00000384506 99 ntBASIC1.55□□□□□ -2.16
NPHP1O15259 MIR520E-201ENST00000384867 87 ntBASIC1.55□□□□□ -2.16
NPHP1O15259 AL133373.1-201ENST00000497098 94 ntBASIC1.55□□□□□ -2.16
NPHP1O15259 C8orf59P2-201ENST00000603441 271 ntBASIC1.55□□□□□ -2.16
NPHP1O15259 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.55□□□□□ -2.16
NPHP1O15259 AL606534.2-204ENST00000635008 178 ntBASIC1.55□□□□□ -2.16
NPHP1O15259 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NPHP1O15259 Y_RNA.197-201ENST00000364004 102 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms