| ARID1A | O14497 | AC141273.2-201 | ENST00000618989 | 130 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| ARID1A | O14497 | ZNF518A-210 | ENST00000624776 | 7994 nt | APPRIS P1 TSL 1 (best) BASIC | 1.24 | □□□□□ -2.21 | | |
| ARID1A | O14497 | MIR126-201 | ENST00000362291 | 85 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | SNORD114-6-201 | ENST00000364393 | 72 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | MIR218-1-201 | ENST00000384999 | 110 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AL031003.1-201 | ENST00000404229 | 172 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | TOMM22P2-201 | ENST00000430735 | 237 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | MTCO1P5-201 | ENST00000433573 | 344 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AC005002.2-201 | ENST00000438228 | 269 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU6-948P-201 | ENST00000516374 | 107 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU2-12P-201 | ENST00000517216 | 168 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AL162424.1-201 | ENST00000602325 | 221 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AL078603.1-201 | ENST00000603824 | 313 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | U91328.3-201 | ENST00000608931 | 354 nt | TSL 3 BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Six3os1_7.1-201 | ENST00000621512 | 201 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | UBE2WP1-201 | ENST00000362030 | 340 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.539-201 | ENST00000384635 | 107 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.556-201 | ENST00000384677 | 113 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AL136320.1-201 | ENST00000417273 | 430 nt | TSL 3 BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | MRPS10P1-201 | ENST00000448483 | 130 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | SNORD65B-201 | ENST00000459126 | 73 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AC097462.1-201 | ENST00000514125 | 324 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AC107973.1-201 | ENST00000530249 | 576 nt | TSL 4 BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | MIR3198-2-201 | ENST00000577868 | 80 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| ARID1A | O14497 | ZNF702P-202 | ENST00000434269 | 1966 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.105-201 | ENST00000363182 | 111 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.188-201 | ENST00000363952 | 111 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU6-1240P-201 | ENST00000365155 | 104 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.416-201 | ENST00000384014 | 113 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.418-201 | ENST00000384029 | 102 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.447-201 | ENST00000384184 | 113 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.461-201 | ENST00000384263 | 103 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU6-376P-201 | ENST00000384731 | 106 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | SNORD58.1-201 | ENST00000391313 | 66 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | LINC01509-202 | ENST00000423523 | 408 nt | TSL 3 BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | BTF3P11-201 | ENST00000426582 | 477 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AC016717.1-201 | ENST00000448918 | 286 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RPS29P23-201 | ENST00000458635 | 123 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RPL39P38-201 | ENST00000467018 | 153 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AC098869.1-201 | ENST00000481627 | 292 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | TRAPPC2P7-201 | ENST00000509650 | 231 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU6-1023P-201 | ENST00000516137 | 106 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.680-201 | ENST00000516441 | 93 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU2-34P-201 | ENST00000516534 | 121 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU6-107P-201 | ENST00000516643 | 102 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU1-117P-201 | ENST00000517041 | 158 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | MIR4503-201 | ENST00000582187 | 83 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AC006001.4-201 | ENST00000622243 | 395 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AC008873.1-201 | ENST00000625051 | 138 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.30-201 | ENST00000362572 | 97 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | SNORD81.1-201 | ENST00000363064 | 77 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNA5SP493-201 | ENST00000364115 | 91 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | SNORD114-22-201 | ENST00000365423 | 72 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU6-418P-201 | ENST00000384035 | 107 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.456-201 | ENST00000384232 | 111 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU6-937P-201 | ENST00000384325 | 106 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RNU6-21P-201 | ENST00000384710 | 107 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | MIR548B-201 | ENST00000385247 | 97 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | MIR1304-201 | ENST00000408243 | 91 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | MIR1262-201 | ENST00000408276 | 93 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AC091179.3-201 | ENST00000474761 | 144 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | MIR3145-201 | ENST00000580727 | 82 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | AL096840.1-201 | ENST00000603287 | 93 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | DSCR8-208 | ENST00000614538 | 403 nt | APPRIS P5 TSL 5 BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | RBMS2-209 | ENST00000639027 | 192 nt | TSL 5 BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | CCDC68-202 | ENST00000432185 | 4014 nt | APPRIS P1 TSL 1 (best) BASIC | 1.22 | □□□□□ -2.21 | | |
| ARID1A | O14497 | Y_RNA.275-201 | ENST00000364726 | 110 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| ARID1A | O14497 | Y_RNA.307-201 | ENST00000365022 | 117 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNU7-141P-201 | ENST00000459304 | 62 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNU6-408P-201 | ENST00000515910 | 100 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| ARID1A | O14497 | AC040936.1-201 | ENST00000534543 | 172 nt | TSL 5 BASIC | 1.21 | □□□□□ -2.22 | | |
| ARID1A | O14497 | AL078604.3-201 | ENST00000615580 | 211 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| ARID1A | O14497 | U6.115-201 | ENST00000636045 | 103 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNU1-23P-201 | ENST00000363361 | 144 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNU6-379P-201 | ENST00000363813 | 104 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNU6-801P-201 | ENST00000364087 | 105 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNA5SP467-201 | ENST00000391274 | 118 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | Y_RNA.590-201 | ENST00000410140 | 107 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNU6-710P-201 | ENST00000410424 | 105 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | CST2P1-201 | ENST00000425770 | 87 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | LINC02238-202 | ENST00000436262 | 320 nt | TSL 3 BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNU2-31P-201 | ENST00000516954 | 155 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | AL353149.1-201 | ENST00000610667 | 244 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | MIPOL1-203 | ENST00000537471 | 5954 nt | APPRIS P1 TSL 5 BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | Y_RNA.124-201 | ENST00000363339 | 93 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | Y_RNA.288-201 | ENST00000364854 | 92 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNU6-407P-201 | ENST00000365280 | 104 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNU6-1248P-201 | ENST00000391096 | 64 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | MIR1285-1-201 | ENST00000408593 | 84 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | AC123900.1-201 | ENST00000420390 | 96 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | AP002001.1-203 | ENST00000534002 | 267 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | AC092138.2-201 | ENST00000563811 | 428 nt | TSL 5 BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | MIR4438-201 | ENST00000585271 | 93 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | AC005972.2-201 | ENST00000604690 | 348 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | AC013791.1-201 | ENST00000616619 | 62 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | MIR6767-201 | ENST00000637302 | 66 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | SLC25A46-204 | ENST00000504098 | 2345 nt | TSL 5 BASIC | 1.2 | □□□□□ -2.22 | | |
| ARID1A | O14497 | RNU1-96P-201 | ENST00000364163 | 162 nt | BASIC | 1.19 | □□□□□ -2.22 | | |