Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SUMO1P2-201ENST00000452524 304 ntBASIC0.22□□□□□ -2.37
UPK2O00526 SNORD5.1-201ENST00000458800 75 ntBASIC0.22□□□□□ -2.37
UPK2O00526 AL355073.2-201ENST00000612106 557 ntBASIC0.22□□□□□ -2.37
UPK2O00526 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.22□□□□□ -2.37
UPK2O00526 RNU6-369P-201ENST00000362515 102 ntBASIC0.21□□□□□ -2.38
UPK2O00526 Y_RNA.164-201ENST00000363709 102 ntBASIC0.21□□□□□ -2.38
UPK2O00526 SNORD115-30-201ENST00000364117 82 ntBASIC0.21□□□□□ -2.38
UPK2O00526 MIR573-201ENST00000384964 99 ntBASIC0.21□□□□□ -2.38
UPK2O00526 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.21□□□□□ -2.38
UPK2O00526 SNRPGP10-201ENST00000432323 225 ntBASIC0.21□□□□□ -2.38
UPK2O00526 MTND1P4-201ENST00000435196 415 ntBASIC0.21□□□□□ -2.38
UPK2O00526 snoU13.21-201ENST00000459368 105 ntBASIC0.21□□□□□ -2.38
UPK2O00526 RNU6-329P-201ENST00000459618 107 ntBASIC0.21□□□□□ -2.38
UPK2O00526 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.21□□□□□ -2.38
UPK2O00526 RNU6-566P-201ENST00000516790 107 ntBASIC0.21□□□□□ -2.38
UPK2O00526 RNU6-1314P-201ENST00000517139 104 ntBASIC0.21□□□□□ -2.38
UPK2O00526 AC055872.1-201ENST00000570978 278 ntBASIC0.21□□□□□ -2.38
UPK2O00526 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.21□□□□□ -2.38
UPK2O00526 MIR548AR-201ENST00000582191 57 ntBASIC0.21□□□□□ -2.38
UPK2O00526 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.21□□□□□ -2.38
UPK2O00526 MIR3662-201ENST00000637030 95 ntBASIC0.21□□□□□ -2.38
UPK2O00526 SNORD114-7-201ENST00000362520 77 ntBASIC0.2□□□□□ -2.38
UPK2O00526 RNU1-133P-201ENST00000364867 167 ntBASIC0.2□□□□□ -2.38
UPK2O00526 snoU2-30.1-201ENST00000365012 70 ntBASIC0.2□□□□□ -2.38
UPK2O00526 Y_RNA.361-201ENST00000365515 120 ntBASIC0.2□□□□□ -2.38
UPK2O00526 SNORD116-9-201ENST00000384000 95 ntBASIC0.2□□□□□ -2.38
UPK2O00526 SNORD116-3-201ENST00000384287 95 ntBASIC0.2□□□□□ -2.38
UPK2O00526 SNORD116-7-201ENST00000384404 95 ntBASIC0.2□□□□□ -2.38
UPK2O00526 SNORD116-5-201ENST00000384462 95 ntBASIC0.2□□□□□ -2.38
UPK2O00526 MIR520H-201ENST00000385126 88 ntBASIC0.2□□□□□ -2.38
UPK2O00526 SNORD12B-201ENST00000410433 91 ntBASIC0.2□□□□□ -2.38
UPK2O00526 RNA5SP247-201ENST00000411181 105 ntBASIC0.2□□□□□ -2.38
UPK2O00526 AC015818.7-201ENST00000428754 109 ntBASIC0.2□□□□□ -2.38
UPK2O00526 AC087499.7-201ENST00000441958 109 ntBASIC0.2□□□□□ -2.38
UPK2O00526 UBE2V1P7-201ENST00000446395 340 ntBASIC0.2□□□□□ -2.38
UPK2O00526 MTND1P17-201ENST00000448961 204 ntBASIC0.2□□□□□ -2.38
UPK2O00526 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.2□□□□□ -2.38
UPK2O00526 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.2□□□□□ -2.38
UPK2O00526 AC093534.1-201ENST00000504977 132 ntBASIC0.2□□□□□ -2.38
UPK2O00526 AC105313.1-201ENST00000509121 353 ntBASIC0.2□□□□□ -2.38
UPK2O00526 RNU6-408P-201ENST00000515910 100 ntBASIC0.2□□□□□ -2.38
UPK2O00526 RNU6-1223P-201ENST00000517124 104 ntBASIC0.2□□□□□ -2.38
UPK2O00526 AC105029.1-201ENST00000520250 669 ntBASIC0.2□□□□□ -2.38
UPK2O00526 MIR3124-201ENST00000582636 67 ntBASIC0.2□□□□□ -2.38
UPK2O00526 AC104695.3-201ENST00000604052 296 ntBASIC0.2□□□□□ -2.38
UPK2O00526 AL162730.1-201ENST00000605734 292 ntBASIC0.2□□□□□ -2.38
UPK2O00526 AC004467.1-201ENST00000615678 330 ntBASIC0.2□□□□□ -2.38
UPK2O00526 RMST_2.1-201ENST00000617263 136 ntBASIC0.2□□□□□ -2.38
UPK2O00526 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.2□□□□□ -2.38
UPK2O00526 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.2□□□□□ -2.38
UPK2O00526 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
UPK2O00526 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.19□□□□□ -2.38
UPK2O00526 MIR103A1-201ENST00000362165 78 ntBASIC0.19□□□□□ -2.38
UPK2O00526 Y_RNA.368-201ENST00000365547 113 ntBASIC0.19□□□□□ -2.38
UPK2O00526 VTRNA1-3-201ENST00000365645 89 ntBASIC0.19□□□□□ -2.38
UPK2O00526 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.19□□□□□ -2.38
UPK2O00526 RNU6-613P-201ENST00000410412 108 ntBASIC0.19□□□□□ -2.38
UPK2O00526 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.19□□□□□ -2.38
UPK2O00526 MTCO3P10-201ENST00000455912 772 ntBASIC0.19□□□□□ -2.38
UPK2O00526 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.19□□□□□ -2.38
UPK2O00526 RNU2-12P-201ENST00000517216 168 ntBASIC0.19□□□□□ -2.38
UPK2O00526 MIR4711-201ENST00000578274 70 ntBASIC0.19□□□□□ -2.38
UPK2O00526 AC018638.8-201ENST00000588755 281 ntBASIC0.19□□□□□ -2.38
UPK2O00526 MIR18A-201ENST00000362310 71 ntBASIC0.18□□□□□ -2.38
UPK2O00526 Y_RNA.2-201ENST00000362330 96 ntBASIC0.18□□□□□ -2.38
UPK2O00526 Y_RNA.51-201ENST00000362725 102 ntBASIC0.18□□□□□ -2.38
UPK2O00526 RNU6-1310P-201ENST00000384153 107 ntBASIC0.18□□□□□ -2.38
UPK2O00526 MIR520F-201ENST00000384824 87 ntBASIC0.18□□□□□ -2.38
UPK2O00526 RNU6-131P-201ENST00000391144 107 ntBASIC0.18□□□□□ -2.38
UPK2O00526 SNORD83.1-201ENST00000411362 77 ntBASIC0.18□□□□□ -2.38
UPK2O00526 MTCO2P27-201ENST00000420740 428 ntBASIC0.18□□□□□ -2.38
UPK2O00526 MTND4LP16-201ENST00000440828 295 ntBASIC0.18□□□□□ -2.38
UPK2O00526 MTND1P1-201ENST00000445453 368 ntBASIC0.18□□□□□ -2.38
UPK2O00526 Y_RNA.688-201ENST00000516565 95 ntBASIC0.18□□□□□ -2.38
UPK2O00526 RNU6-314P-201ENST00000516574 104 ntBASIC0.18□□□□□ -2.38
UPK2O00526 MIR4790-201ENST00000577799 79 ntBASIC0.18□□□□□ -2.38
UPK2O00526 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
UPK2O00526 AL078603.1-201ENST00000603824 313 ntBASIC0.18□□□□□ -2.38
UPK2O00526 AC018462.2-201ENST00000605375 395 ntBASIC0.18□□□□□ -2.38
UPK2O00526 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
UPK2O00526 Y_RNA.168-201ENST00000363740 102 ntBASIC0.17□□□□□ -2.38
UPK2O00526 RNU6-961P-201ENST00000363893 105 ntBASIC0.17□□□□□ -2.38
UPK2O00526 RNU6-342P-201ENST00000384521 104 ntBASIC0.17□□□□□ -2.38
UPK2O00526 MIR499A-201ENST00000384903 122 ntBASIC0.17□□□□□ -2.38
UPK2O00526 MIR936-201ENST00000401264 98 ntBASIC0.17□□□□□ -2.38
UPK2O00526 AL031003.1-201ENST00000404229 172 ntBASIC0.17□□□□□ -2.38
UPK2O00526 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.17□□□□□ -2.38
UPK2O00526 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.17□□□□□ -2.38
UPK2O00526 HMGN2P32-201ENST00000444648 269 ntBASIC0.17□□□□□ -2.38
UPK2O00526 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
UPK2O00526 AC026782.1-201ENST00000512952 449 ntBASIC0.17□□□□□ -2.38
UPK2O00526 MIR2115-201ENST00000516657 100 ntBASIC0.17□□□□□ -2.38
UPK2O00526 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.17□□□□□ -2.38
UPK2O00526 AC005972.2-201ENST00000604690 348 ntBASIC0.17□□□□□ -2.38
UPK2O00526 AC015726.2-201ENST00000620112 122 ntBASIC0.17□□□□□ -2.38
UPK2O00526 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
UPK2O00526 RNU6-1301P-201ENST00000362724 104 ntBASIC0.16□□□□□ -2.38
UPK2O00526 RNU6-926P-201ENST00000384075 107 ntBASIC0.16□□□□□ -2.38
UPK2O00526 MIR216A-201ENST00000385063 110 ntBASIC0.16□□□□□ -2.38
UPK2O00526 RNA5SP193-201ENST00000410353 107 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms