Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.38□□□□□ -2.19
RTCAO00442 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.38□□□□□ -2.19
RTCAO00442 PGBD4P5-201ENST00000445958 426 ntBASIC1.38□□□□□ -2.19
RTCAO00442 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
RTCAO00442 AC008269.2-201ENST00000561915 1105 ntBASIC1.38□□□□□ -2.19
RTCAO00442 AL929325.1-201ENST00000603096 117 ntBASIC1.38□□□□□ -2.19
RTCAO00442 SNORD113-5-201ENST00000607261 78 ntBASIC1.38□□□□□ -2.19
RTCAO00442 AC040896.1-201ENST00000613819 479 ntBASIC1.38□□□□□ -2.19
RTCAO00442 AL513423.1-201ENST00000621695 132 ntBASIC1.38□□□□□ -2.19
RTCAO00442 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
RTCAO00442 RNU6-101P-201ENST00000410323 104 ntBASIC1.37□□□□□ -2.19
RTCAO00442 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.37□□□□□ -2.19
RTCAO00442 AC091021.1-201ENST00000468051 388 ntBASIC1.37□□□□□ -2.19
RTCAO00442 SEPT14P8-201ENST00000508026 178 ntBASIC1.37□□□□□ -2.19
RTCAO00442 AL512310.8-201ENST00000550183 120 ntBASIC1.37□□□□□ -2.19
RTCAO00442 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
RTCAO00442 AC136932.1-201ENST00000574771 208 ntBASIC1.37□□□□□ -2.19
RTCAO00442 MIR4300-201ENST00000581016 96 ntBASIC1.37□□□□□ -2.19
RTCAO00442 AL356055.1-201ENST00000602528 446 ntBASIC1.37□□□□□ -2.19
RTCAO00442 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.37□□□□□ -2.19
RTCAO00442 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.37□□□□□ -2.19
RTCAO00442 AP000648.3-201ENST00000623539 4507 ntBASIC1.37□□□□□ -2.19
RTCAO00442 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.37□□□□□ -2.19
RTCAO00442 Y_RNA.143-201ENST00000363520 106 ntBASIC1.36□□□□□ -2.19
RTCAO00442 Y_RNA.329-201ENST00000365209 107 ntBASIC1.36□□□□□ -2.19
RTCAO00442 Y_RNA.331-201ENST00000365267 102 ntBASIC1.36□□□□□ -2.19
RTCAO00442 SNORA33.2-201ENST00000365413 134 ntBASIC1.36□□□□□ -2.19
RTCAO00442 Y_RNA.368-201ENST00000365547 113 ntBASIC1.36□□□□□ -2.19
RTCAO00442 Y_RNA.455-201ENST00000384230 98 ntBASIC1.36□□□□□ -2.19
RTCAO00442 RNU6-937P-201ENST00000384325 106 ntBASIC1.36□□□□□ -2.19
RTCAO00442 SNORD115-46-201ENST00000390982 71 ntBASIC1.36□□□□□ -2.19
RTCAO00442 RNA5SP482-201ENST00000391269 118 ntBASIC1.36□□□□□ -2.19
RTCAO00442 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
RTCAO00442 MIR4680-201ENST00000580906 66 ntBASIC1.36□□□□□ -2.19
RTCAO00442 RAC1P9-201ENST00000604990 392 ntBASIC1.36□□□□□ -2.19
RTCAO00442 AC073349.3-201ENST00000617616 186 ntBASIC1.36□□□□□ -2.19
RTCAO00442 AL353997.5-201ENST00000618886 171 ntBASIC1.36□□□□□ -2.19
RTCAO00442 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RTCAO00442 SNORA1B-201ENST00000362535 133 ntBASIC1.35□□□□□ -2.19
RTCAO00442 Y_RNA.456-201ENST00000384232 111 ntBASIC1.35□□□□□ -2.19
RTCAO00442 SNORA67.5-201ENST00000391036 107 ntBASIC1.35□□□□□ -2.19
RTCAO00442 RNA5SP511-201ENST00000410487 115 ntBASIC1.35□□□□□ -2.19
RTCAO00442 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
RTCAO00442 U8.19-201ENST00000459095 133 ntBASIC1.35□□□□□ -2.19
RTCAO00442 RNU7-34P-201ENST00000459394 64 ntBASIC1.35□□□□□ -2.19
RTCAO00442 HMGN1P10-201ENST00000474557 553 ntBASIC1.35□□□□□ -2.19
RTCAO00442 OR9P1P-201ENST00000496431 281 ntBASIC1.35□□□□□ -2.19
RTCAO00442 RNU7-110P-201ENST00000516891 62 ntBASIC1.35□□□□□ -2.19
RTCAO00442 RNU6-897P-201ENST00000517135 105 ntBASIC1.35□□□□□ -2.19
RTCAO00442 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
RTCAO00442 AC113195.1-201ENST00000579952 141 ntBASIC1.35□□□□□ -2.19
RTCAO00442 AC004832.4-201ENST00000608952 331 ntBASIC1.35□□□□□ -2.19
RTCAO00442 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.35□□□□□ -2.19
RTCAO00442 Y_RNA.136-201ENST00000363444 102 ntBASIC1.34□□□□□ -2.19
RTCAO00442 Y_RNA.310-201ENST00000365063 113 ntBASIC1.34□□□□□ -2.19
RTCAO00442 Y_RNA.389-201ENST00000383924 113 ntBASIC1.34□□□□□ -2.19
RTCAO00442 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
RTCAO00442 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.34□□□□□ -2.19
RTCAO00442 AC024067.1-201ENST00000426199 223 ntBASIC1.34□□□□□ -2.19
RTCAO00442 RPS20P10-201ENST00000451209 253 ntBASIC1.34□□□□□ -2.19
RTCAO00442 RNU6-1096P-201ENST00000517089 102 ntBASIC1.34□□□□□ -2.19
RTCAO00442 CYP3A52P-201ENST00000563326 91 ntBASIC1.34□□□□□ -2.19
RTCAO00442 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.34□□□□□ -2.19
RTCAO00442 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.34□□□□□ -2.19
RTCAO00442 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
RTCAO00442 RNU6-324P-201ENST00000363957 106 ntBASIC1.33□□□□□ -2.2
RTCAO00442 Y_RNA.216-201ENST00000364205 93 ntBASIC1.33□□□□□ -2.2
RTCAO00442 RNU6-1323P-201ENST00000384025 107 ntBASIC1.33□□□□□ -2.2
RTCAO00442 Y_RNA.422-201ENST00000384054 114 ntBASIC1.33□□□□□ -2.2
RTCAO00442 SNORD116-13-201ENST00000384408 92 ntBASIC1.33□□□□□ -2.2
RTCAO00442 RNU6-21P-201ENST00000384710 107 ntBASIC1.33□□□□□ -2.2
RTCAO00442 Y_RNA.581-201ENST00000391017 97 ntBASIC1.33□□□□□ -2.2
RTCAO00442 RNU6-985P-201ENST00000410182 104 ntBASIC1.33□□□□□ -2.2
RTCAO00442 RPS4XP11-201ENST00000446897 772 ntBASIC1.33□□□□□ -2.2
RTCAO00442 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.33□□□□□ -2.2
RTCAO00442 RNU6-1143P-201ENST00000516125 104 ntBASIC1.33□□□□□ -2.2
RTCAO00442 RNU6-496P-201ENST00000516145 99 ntBASIC1.33□□□□□ -2.2
RTCAO00442 RNU2-56P-201ENST00000516826 190 ntBASIC1.33□□□□□ -2.2
RTCAO00442 MIR3664-201ENST00000579074 99 ntBASIC1.33□□□□□ -2.2
RTCAO00442 MIR4524B-201ENST00000581569 115 ntBASIC1.33□□□□□ -2.2
RTCAO00442 AC005972.2-201ENST00000604690 348 ntBASIC1.33□□□□□ -2.2
RTCAO00442 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.33□□□□□ -2.2
RTCAO00442 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RTCAO00442 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
RTCAO00442 Y_RNA.172-201ENST00000363765 102 ntBASIC1.32□□□□□ -2.2
RTCAO00442 U8.5-201ENST00000364528 136 ntBASIC1.32□□□□□ -2.2
RTCAO00442 RNU6-450P-201ENST00000364654 107 ntBASIC1.32□□□□□ -2.2
RTCAO00442 RNU6-639P-201ENST00000384074 107 ntBASIC1.32□□□□□ -2.2
RTCAO00442 RNU6-424P-201ENST00000384367 105 ntBASIC1.32□□□□□ -2.2
RTCAO00442 MIR660-201ENST00000385235 97 ntBASIC1.32□□□□□ -2.2
RTCAO00442 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
RTCAO00442 RNU6-1248P-201ENST00000391096 64 ntBASIC1.32□□□□□ -2.2
RTCAO00442 AC010655.3-201ENST00000478818 450 ntBASIC1.32□□□□□ -2.2
RTCAO00442 RNU6-1046P-201ENST00000516538 107 ntBASIC1.32□□□□□ -2.2
RTCAO00442 RNU6-63P-201ENST00000516690 95 ntBASIC1.32□□□□□ -2.2
RTCAO00442 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.32□□□□□ -2.2
RTCAO00442 MIR4762-201ENST00000585261 75 ntBASIC1.32□□□□□ -2.2
RTCAO00442 AL365434.2-201ENST00000607979 234 ntBASIC1.32□□□□□ -2.2
RTCAO00442 MIR376A1-201ENST00000616574 68 ntBASIC1.32□□□□□ -2.2
RTCAO00442 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms