Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.48□□□□□ -2.17
O00370 RNU7-95P-201ENST00000459222 64 ntBASIC1.48□□□□□ -2.17
O00370 RNU6-436P-201ENST00000516171 114 ntBASIC1.48□□□□□ -2.17
O00370 SNORA31.10-201ENST00000516482 106 ntBASIC1.48□□□□□ -2.17
O00370 RNU6-1096P-201ENST00000517089 102 ntBASIC1.48□□□□□ -2.17
O00370 AC019176.1-201ENST00000518519 225 ntBASIC1.48□□□□□ -2.17
O00370 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.48□□□□□ -2.17
O00370 PRR13P7-201ENST00000605538 430 ntBASIC1.48□□□□□ -2.17
O00370 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
O00370 Y_RNA.455-201ENST00000384230 98 ntBASIC1.47□□□□□ -2.17
O00370 RNU6-950P-201ENST00000384651 107 ntBASIC1.47□□□□□ -2.17
O00370 RNA5SP511-201ENST00000410487 115 ntBASIC1.47□□□□□ -2.17
O00370 RN7SKP200-201ENST00000410564 320 ntBASIC1.47□□□□□ -2.17
O00370 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.47□□□□□ -2.17
O00370 POLR2KP2-201ENST00000438155 177 ntBASIC1.47□□□□□ -2.17
O00370 SNRPGP13-201ENST00000442212 177 ntBASIC1.47□□□□□ -2.17
O00370 AC005840.1-201ENST00000498412 377 ntBASIC1.47□□□□□ -2.17
O00370 RNA5SP445-201ENST00000515889 115 ntBASIC1.47□□□□□ -2.17
O00370 RNY3P15-201ENST00000516297 97 ntBASIC1.47□□□□□ -2.17
O00370 RNU6-897P-201ENST00000517135 105 ntBASIC1.47□□□□□ -2.17
O00370 AC131281.1-201ENST00000522984 164 ntBASIC1.47□□□□□ -2.17
O00370 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.47□□□□□ -2.17
O00370 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.47□□□□□ -2.17
O00370 AP003072.1-201ENST00000531740 145 ntBASIC1.47□□□□□ -2.17
O00370 AL161670.1-201ENST00000554348 137 ntBASIC1.47□□□□□ -2.17
O00370 AC136932.1-201ENST00000574771 208 ntBASIC1.47□□□□□ -2.17
O00370 SNORA77B-201ENST00000578179 125 ntBASIC1.47□□□□□ -2.17
O00370 MIR4680-201ENST00000580906 66 ntBASIC1.47□□□□□ -2.17
O00370 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.47□□□□□ -2.17
O00370 AL359821.1-201ENST00000605519 182 ntBASIC1.47□□□□□ -2.17
O00370 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
O00370 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
O00370 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
O00370 ZNF209P-201ENST00000593450 2304 ntBASIC1.46□□□□□ -2.18
O00370 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
O00370 SNORD113-8-201ENST00000363497 74 ntBASIC1.46□□□□□ -2.18
O00370 Y_RNA.158-201ENST00000363651 101 ntBASIC1.46□□□□□ -2.18
O00370 Y_RNA.172-201ENST00000363765 102 ntBASIC1.46□□□□□ -2.18
O00370 Y_RNA.226-201ENST00000364337 114 ntBASIC1.46□□□□□ -2.18
O00370 Y_RNA.286-201ENST00000364813 102 ntBASIC1.46□□□□□ -2.18
O00370 RNU11-5P-201ENST00000391216 129 ntBASIC1.46□□□□□ -2.18
O00370 MIR1252-201ENST00000408861 65 ntBASIC1.46□□□□□ -2.18
O00370 AL390729.2-201ENST00000416137 156 ntBASIC1.46□□□□□ -2.18
O00370 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
O00370 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.46□□□□□ -2.18
O00370 RNU6-902P-201ENST00000517212 91 ntBASIC1.46□□□□□ -2.18
O00370 AC068338.1-201ENST00000565567 176 ntBASIC1.46□□□□□ -2.18
O00370 AL512598.1-201ENST00000610158 273 ntBASIC1.46□□□□□ -2.18
O00370 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
O00370 AL121890.5-201ENST00000620848 304 ntBASIC1.46□□□□□ -2.18
O00370 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.46□□□□□ -2.18
O00370 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.46□□□□□ -2.18
O00370 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
O00370 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
O00370 SNORA1B-201ENST00000362535 133 ntBASIC1.45□□□□□ -2.18
O00370 SNORA33.2-201ENST00000365413 134 ntBASIC1.45□□□□□ -2.18
O00370 RNA5SP259-201ENST00000365541 109 ntBASIC1.45□□□□□ -2.18
O00370 SNORA63.7-201ENST00000365579 123 ntBASIC1.45□□□□□ -2.18
O00370 AC117470.1-201ENST00000381974 330 ntBASIC1.45□□□□□ -2.18
O00370 RNU6-639P-201ENST00000384074 107 ntBASIC1.45□□□□□ -2.18
O00370 Y_RNA.462-201ENST00000384268 102 ntBASIC1.45□□□□□ -2.18
O00370 RNU6-1031P-201ENST00000384773 107 ntBASIC1.45□□□□□ -2.18
O00370 AL590004.1-201ENST00000405321 300 ntBASIC1.45□□□□□ -2.18
O00370 AL034345.1-201ENST00000407768 123 ntBASIC1.45□□□□□ -2.18
O00370 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
O00370 RPL30P13-201ENST00000418873 348 ntBASIC1.45□□□□□ -2.18
O00370 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.45□□□□□ -2.18
O00370 AC079140.2-201ENST00000506193 142 ntBASIC1.45□□□□□ -2.18
O00370 TRMT112P2-201ENST00000512910 132 ntBASIC1.45□□□□□ -2.18
O00370 MIR4423-201ENST00000580922 80 ntBASIC1.45□□□□□ -2.18
O00370 MIR4300-201ENST00000581016 96 ntBASIC1.45□□□□□ -2.18
O00370 AC021506.2-201ENST00000612354 169 ntBASIC1.45□□□□□ -2.18
O00370 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
O00370 RNU6-694P-201ENST00000364071 147 ntBASIC1.44□□□□□ -2.18
O00370 SNORD1A-201ENST00000364968 72 ntBASIC1.44□□□□□ -2.18
O00370 RNU6-117P-201ENST00000365415 107 ntBASIC1.44□□□□□ -2.18
O00370 RNU6-1227P-201ENST00000383981 107 ntBASIC1.44□□□□□ -2.18
O00370 RNU6-1080P-201ENST00000383982 107 ntBASIC1.44□□□□□ -2.18
O00370 RNU6-102P-201ENST00000384485 104 ntBASIC1.44□□□□□ -2.18
O00370 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
O00370 RNU2-61P-201ENST00000411069 191 ntBASIC1.44□□□□□ -2.18
O00370 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
O00370 AC010655.3-201ENST00000478818 450 ntBASIC1.44□□□□□ -2.18
O00370 RNU6-1137P-201ENST00000517073 99 ntBASIC1.44□□□□□ -2.18
O00370 SUMO2P16-201ENST00000519475 264 ntBASIC1.44□□□□□ -2.18
O00370 AL160236.1-201ENST00000556317 195 ntBASIC1.44□□□□□ -2.18
O00370 AC113195.1-201ENST00000579952 141 ntBASIC1.44□□□□□ -2.18
O00370 MIR3937-201ENST00000580135 106 ntBASIC1.44□□□□□ -2.18
O00370 AC068647.2-201ENST00000637380 353 ntBASIC1.44□□□□□ -2.18
O00370 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
O00370 MIR337-201ENST00000362281 93 ntBASIC1.43□□□□□ -2.18
O00370 SNORD81.1-201ENST00000363064 77 ntBASIC1.43□□□□□ -2.18
O00370 RNU4-80P-201ENST00000363200 141 ntBASIC1.43□□□□□ -2.18
O00370 SNORA63-201ENST00000363450 132 ntBASIC1.43□□□□□ -2.18
O00370 Y_RNA.383-201ENST00000383855 97 ntBASIC1.43□□□□□ -2.18
O00370 MIR520G-201ENST00000385064 90 ntBASIC1.43□□□□□ -2.18
O00370 MIR513A1-201ENST00000385138 129 ntBASIC1.43□□□□□ -2.18
O00370 AC113618.1-201ENST00000416747 285 ntBASIC1.43□□□□□ -2.18
O00370 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.43□□□□□ -2.18
O00370 AC024067.1-201ENST00000426199 223 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms