Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU6-1337P-201ENST00000516525 95 ntBASIC0.29□□□□□ -2.36
DFFAO00273 AC093027.1-201ENST00000546698 429 ntBASIC0.29□□□□□ -2.36
DFFAO00273 MIR4300-201ENST00000581016 96 ntBASIC0.29□□□□□ -2.36
DFFAO00273 AC090617.10-201ENST00000624308 134 ntBASIC0.29□□□□□ -2.36
DFFAO00273 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.29□□□□□ -2.36
DFFAO00273 MIR6516-201ENST00000630554 81 ntBASIC0.29□□□□□ -2.36
DFFAO00273 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.29□□□□□ -2.36
DFFAO00273 AL589743.1-201ENST00000551932 2712 ntBASIC0.28□□□□□ -2.36
DFFAO00273 Y_RNA.796-201ENST00000364268 102 ntBASIC0.28□□□□□ -2.36
DFFAO00273 Y_RNA.799-201ENST00000364992 102 ntBASIC0.28□□□□□ -2.36
DFFAO00273 SNORD116-9-201ENST00000384000 95 ntBASIC0.28□□□□□ -2.36
DFFAO00273 SNORD116-3-201ENST00000384287 95 ntBASIC0.28□□□□□ -2.36
DFFAO00273 SNORD116-7-201ENST00000384404 95 ntBASIC0.28□□□□□ -2.36
DFFAO00273 SNORD116-5-201ENST00000384462 95 ntBASIC0.28□□□□□ -2.36
DFFAO00273 SNORA2B-201ENST00000384583 137 ntBASIC0.28□□□□□ -2.36
DFFAO00273 Y_RNA.557-201ENST00000384680 107 ntBASIC0.28□□□□□ -2.36
DFFAO00273 MIR522-201ENST00000385071 87 ntBASIC0.28□□□□□ -2.36
DFFAO00273 RNU6-177P-201ENST00000411257 104 ntBASIC0.28□□□□□ -2.36
DFFAO00273 AL390729.2-201ENST00000416137 156 ntBASIC0.28□□□□□ -2.36
DFFAO00273 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.28□□□□□ -2.36
DFFAO00273 MTND1P17-201ENST00000448961 204 ntBASIC0.28□□□□□ -2.36
DFFAO00273 RNU6-1088P-201ENST00000516850 104 ntBASIC0.28□□□□□ -2.36
DFFAO00273 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.28□□□□□ -2.37
DFFAO00273 RNU6-874P-201ENST00000362390 105 ntBASIC0.27□□□□□ -2.37
DFFAO00273 RNY1P16-201ENST00000363063 111 ntBASIC0.27□□□□□ -2.37
DFFAO00273 Y_RNA.253-201ENST00000364562 112 ntBASIC0.27□□□□□ -2.37
DFFAO00273 RNU6-700P-201ENST00000391043 107 ntBASIC0.27□□□□□ -2.37
DFFAO00273 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.27□□□□□ -2.37
DFFAO00273 U8.22-201ENST00000459141 133 ntBASIC0.27□□□□□ -2.37
DFFAO00273 SNORD45.4-201ENST00000516629 73 ntBASIC0.27□□□□□ -2.37
DFFAO00273 AC105029.1-201ENST00000520250 669 ntBASIC0.27□□□□□ -2.37
DFFAO00273 MTND3P12-201ENST00000559068 328 ntBASIC0.27□□□□□ -2.37
DFFAO00273 AC005014.2-201ENST00000607795 599 ntBASIC0.27□□□□□ -2.37
DFFAO00273 MIR6128-201ENST00000615528 109 ntBASIC0.27□□□□□ -2.37
DFFAO00273 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.27□□□□□ -2.37
DFFAO00273 MIR4251-201ENST00000635819 61 ntBASIC0.27□□□□□ -2.37
DFFAO00273 AC024614.3-201ENST00000637860 256 ntBASIC0.27□□□□□ -2.37
DFFAO00273 MIR1-1-201ENST00000362147 71 ntBASIC0.26□□□□□ -2.37
DFFAO00273 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
DFFAO00273 Y_RNA.118-201ENST00000363300 101 ntBASIC0.26□□□□□ -2.37
DFFAO00273 SNORD115-30-201ENST00000364117 82 ntBASIC0.26□□□□□ -2.37
DFFAO00273 RNU6-318P-201ENST00000384283 103 ntBASIC0.26□□□□□ -2.37
DFFAO00273 RNU6-613P-201ENST00000410412 108 ntBASIC0.26□□□□□ -2.37
DFFAO00273 RNU6-373P-201ENST00000411247 98 ntBASIC0.26□□□□□ -2.37
DFFAO00273 AC005534.2-201ENST00000431047 433 ntBASIC0.26□□□□□ -2.37
DFFAO00273 HMGN2P32-201ENST00000444648 269 ntBASIC0.26□□□□□ -2.37
DFFAO00273 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.26□□□□□ -2.37
DFFAO00273 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.26□□□□□ -2.37
DFFAO00273 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
DFFAO00273 AC008133.2-201ENST00000624540 351 ntBASIC0.26□□□□□ -2.37
DFFAO00273 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.26□□□□□ -2.37
DFFAO00273 MIR3662-201ENST00000637030 95 ntBASIC0.26□□□□□ -2.37
DFFAO00273 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
DFFAO00273 RNU6-1084P-201ENST00000362498 107 ntBASIC0.25□□□□□ -2.37
DFFAO00273 snoU2-30.1-201ENST00000365012 70 ntBASIC0.25□□□□□ -2.37
DFFAO00273 RNU6-1310P-201ENST00000384153 107 ntBASIC0.25□□□□□ -2.37
DFFAO00273 RNU6-342P-201ENST00000384521 104 ntBASIC0.25□□□□□ -2.37
DFFAO00273 RNA5SP95-201ENST00000410319 137 ntBASIC0.25□□□□□ -2.37
DFFAO00273 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.25□□□□□ -2.37
DFFAO00273 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.25□□□□□ -2.37
DFFAO00273 MTND1P1-201ENST00000445453 368 ntBASIC0.25□□□□□ -2.37
DFFAO00273 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.25□□□□□ -2.37
DFFAO00273 AC105313.1-201ENST00000509121 353 ntBASIC0.25□□□□□ -2.37
DFFAO00273 RNU6-566P-201ENST00000516790 107 ntBASIC0.25□□□□□ -2.37
DFFAO00273 RNU6-1314P-201ENST00000517139 104 ntBASIC0.25□□□□□ -2.37
DFFAO00273 AC022616.4-201ENST00000522985 181 ntBASIC0.25□□□□□ -2.37
DFFAO00273 AC104695.3-201ENST00000604052 296 ntBASIC0.25□□□□□ -2.37
DFFAO00273 AL355073.2-201ENST00000612106 557 ntBASIC0.25□□□□□ -2.37
DFFAO00273 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
DFFAO00273 SNORD114-23-201ENST00000363536 72 ntBASIC0.24□□□□□ -2.37
DFFAO00273 MIR573-201ENST00000384964 99 ntBASIC0.24□□□□□ -2.37
DFFAO00273 MIR216A-201ENST00000385063 110 ntBASIC0.24□□□□□ -2.37
DFFAO00273 RNU2-16P-201ENST00000410712 136 ntBASIC0.24□□□□□ -2.37
DFFAO00273 MLLT10P1-201ENST00000418346 262 ntBASIC0.24□□□□□ -2.37
DFFAO00273 SNORA25.10-201ENST00000515926 124 ntBASIC0.24□□□□□ -2.37
DFFAO00273 RNU2-12P-201ENST00000517216 168 ntBASIC0.24□□□□□ -2.37
DFFAO00273 MTND2P38-201ENST00000522536 667 ntBASIC0.24□□□□□ -2.37
DFFAO00273 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.24□□□□□ -2.37
DFFAO00273 PVT1_3.1-201ENST00000620853 95 ntBASIC0.24□□□□□ -2.37
DFFAO00273 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
DFFAO00273 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.24□□□□□ -2.37
DFFAO00273 Y_RNA.168-201ENST00000363740 102 ntBASIC0.23□□□□□ -2.37
DFFAO00273 RNU6-1090P-201ENST00000364065 94 ntBASIC0.23□□□□□ -2.37
DFFAO00273 RNU6-1013P-201ENST00000384180 107 ntBASIC0.23□□□□□ -2.37
DFFAO00273 RNU6-831P-201ENST00000384548 107 ntBASIC0.23□□□□□ -2.37
DFFAO00273 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.23□□□□□ -2.37
DFFAO00273 MTND4LP16-201ENST00000440828 295 ntBASIC0.23□□□□□ -2.37
DFFAO00273 AC092989.1-201ENST00000481235 277 ntBASIC0.23□□□□□ -2.37
DFFAO00273 Y_RNA.688-201ENST00000516565 95 ntBASIC0.23□□□□□ -2.37
DFFAO00273 MIR2115-201ENST00000516657 100 ntBASIC0.23□□□□□ -2.37
DFFAO00273 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.23□□□□□ -2.37
DFFAO00273 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.23□□□□□ -2.37
DFFAO00273 AC090625.1-201ENST00000357130 210 ntBASIC0.22□□□□□ -2.37
DFFAO00273 Y_RNA.358-201ENST00000365491 99 ntBASIC0.22□□□□□ -2.37
DFFAO00273 RNU2-70P-201ENST00000410718 179 ntBASIC0.22□□□□□ -2.37
DFFAO00273 AC009161.1-201ENST00000417306 376 ntBASIC0.22□□□□□ -2.37
DFFAO00273 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.22□□□□□ -2.37
DFFAO00273 AC109635.3-201ENST00000529536 185 ntBASIC0.22□□□□□ -2.37
DFFAO00273 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
DFFAO00273 AC018462.2-201ENST00000605375 395 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms