Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H3BM21 AL049781.1-201ENST00000623195 3585 ntBASIC3.58□□□□□ -1.84
H3BM21 SNORD9-201ENST00000362566 104 ntBASIC3.58□□□□□ -1.84
H3BM21 SNORA1.1-201ENST00000364671 133 ntBASIC3.58□□□□□ -1.84
H3BM21 Y_RNA.299-201ENST00000364973 94 ntBASIC3.58□□□□□ -1.84
H3BM21 DBIP2-201ENST00000419076 262 ntBASIC3.58□□□□□ -1.84
H3BM21 AC084357.1-201ENST00000473404 255 ntBASIC3.58□□□□□ -1.84
H3BM21 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.58□□□□□ -1.84
H3BM21 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.58□□□□□ -1.84
H3BM21 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.58□□□□□ -1.84
H3BM21 MIR376B-201ENST00000614515 100 ntBASIC3.58□□□□□ -1.84
H3BM21 AL512310.12-203ENST00000640543 90 ntBASIC3.58□□□□□ -1.84
H3BM21 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
H3BM21 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
H3BM21 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.57□□□□□ -1.84
H3BM21 RNU6-1313P-201ENST00000362622 102 ntBASIC3.57□□□□□ -1.84
H3BM21 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
H3BM21 MIR1294-201ENST00000408503 142 ntBASIC3.57□□□□□ -1.84
H3BM21 SNX2P2-201ENST00000424553 323 ntBASIC3.57□□□□□ -1.84
H3BM21 RNU6-1291P-201ENST00000516591 104 ntBASIC3.57□□□□□ -1.84
H3BM21 AP003484.1-201ENST00000530974 250 ntBASIC3.57□□□□□ -1.84
H3BM21 AC140658.3-201ENST00000567603 271 ntBASIC3.57□□□□□ -1.84
H3BM21 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.57□□□□□ -1.84
H3BM21 AC006441.5-201ENST00000612680 209 ntBASIC3.57□□□□□ -1.84
H3BM21 AC244205.2-202ENST00000635781 342 ntBASIC3.57□□□□□ -1.84
H3BM21 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.57□□□□□ -1.84
H3BM21 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.57□□□□□ -1.84
H3BM21 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.57□□□□□ -1.84
H3BM21 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
H3BM21 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
H3BM21 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
H3BM21 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
H3BM21 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
H3BM21 RNU6-234P-201ENST00000365229 104 ntBASIC3.56□□□□□ -1.84
H3BM21 MIR519C-201ENST00000385053 87 ntBASIC3.56□□□□□ -1.84
H3BM21 MTND4LP19-201ENST00000403051 166 ntBASIC3.56□□□□□ -1.84
H3BM21 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.56□□□□□ -1.84
H3BM21 RN7SL601P-201ENST00000471221 293 ntBASIC3.56□□□□□ -1.84
H3BM21 MIR4298-201ENST00000584380 73 ntBASIC3.56□□□□□ -1.84
H3BM21 RNU6-86P-201ENST00000606534 107 ntBASIC3.56□□□□□ -1.84
H3BM21 AC002076.2-201ENST00000617362 122 ntBASIC3.56□□□□□ -1.84
H3BM21 AP003355.3-201ENST00000623465 114 ntBASIC3.56□□□□□ -1.84
H3BM21 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
H3BM21 MFSD8-236ENST00000641509 4050 ntBASIC3.56□□□□□ -1.84
H3BM21 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.56□□□□□ -1.84
H3BM21 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
H3BM21 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
H3BM21 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
H3BM21 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.55□□□□□ -1.84
H3BM21 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
H3BM21 AC093010.3-201ENST00000570269 15214 ntBASIC3.55□□□□□ -1.84
H3BM21 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
H3BM21 MIR342-201ENST00000362212 99 ntBASIC3.55□□□□□ -1.84
H3BM21 AP000567.1-201ENST00000406413 156 ntBASIC3.55□□□□□ -1.84
H3BM21 AC090844.1-201ENST00000422019 156 ntBASIC3.55□□□□□ -1.84
H3BM21 SNORA59A-201ENST00000459326 152 ntBASIC3.55□□□□□ -1.84
H3BM21 AC108729.3-201ENST00000513484 108 ntBASIC3.55□□□□□ -1.84
H3BM21 HIGD1AP1-201ENST00000550979 275 ntBASIC3.55□□□□□ -1.84
H3BM21 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.55□□□□□ -1.84
H3BM21 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
H3BM21 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
H3BM21 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
H3BM21 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
H3BM21 CEP170P1-201ENST00000502249 4587 ntBASIC3.54□□□□□ -1.84
H3BM21 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
H3BM21 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
H3BM21 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
H3BM21 RNU6-1094P-201ENST00000362416 104 ntBASIC3.54□□□□□ -1.84
H3BM21 SNORD115-37-201ENST00000363768 82 ntBASIC3.54□□□□□ -1.84
H3BM21 RNU6-442P-201ENST00000383968 104 ntBASIC3.54□□□□□ -1.84
H3BM21 RNVU1-14-201ENST00000384770 164 ntBASIC3.54□□□□□ -1.84
H3BM21 SNORD77B-201ENST00000391112 67 ntBASIC3.54□□□□□ -1.84
H3BM21 Z92545.1-201ENST00000411782 234 ntBASIC3.54□□□□□ -1.84
H3BM21 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.54□□□□□ -1.84
H3BM21 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.54□□□□□ -1.84
H3BM21 AL161932.1-201ENST00000437408 146 ntBASIC3.54□□□□□ -1.84
H3BM21 RPS12P2-201ENST00000439728 269 ntBASIC3.54□□□□□ -1.84
H3BM21 RNU2-34P-201ENST00000516534 121 ntBASIC3.54□□□□□ -1.84
H3BM21 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.54□□□□□ -1.84
H3BM21 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.54□□□□□ -1.84
H3BM21 AC090517.3-201ENST00000625170 141 ntBASIC3.54□□□□□ -1.84
H3BM21 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.54□□□□□ -1.84
H3BM21 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.54□□□□□ -1.84
H3BM21 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
H3BM21 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
H3BM21 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
H3BM21 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
H3BM21 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.53□□□□□ -1.84
H3BM21 MIR522-201ENST00000385071 87 ntBASIC3.53□□□□□ -1.84
H3BM21 RNU6-129P-201ENST00000391022 107 ntBASIC3.53□□□□□ -1.84
H3BM21 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.53□□□□□ -1.84
H3BM21 RPL31P63-201ENST00000422565 375 ntBASIC3.53□□□□□ -1.84
H3BM21 AC006989.1-201ENST00000427212 131 ntBASIC3.53□□□□□ -1.84
H3BM21 FTH1P12-201ENST00000432137 551 ntBASIC3.53□□□□□ -1.84
H3BM21 AC079598.5-201ENST00000547460 117 ntBASIC3.53□□□□□ -1.84
H3BM21 MIR5195-201ENST00000583555 115 ntBASIC3.53□□□□□ -1.84
H3BM21 MIR6076-201ENST00000617521 113 ntBASIC3.53□□□□□ -1.84
H3BM21 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
H3BM21 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H3BM21 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 218.3 ms