Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
MBD3L4A6NDZ8 AC100821.1-201ENST00000523153 2479 ntBASIC2.09□□□□□ -2.08
MBD3L4A6NDZ8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.09□□□□□ -2.08
MBD3L4A6NDZ8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 SNORA63D-201ENST00000364359 132 ntBASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 AL158823.1-201ENST00000418441 478 ntBASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 AL591806.2-201ENST00000433122 173 ntBASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 RPS27P1-201ENST00000450552 247 ntBASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 RNU6-437P-201ENST00000459408 95 ntBASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 RNA5SP437-201ENST00000517249 129 ntBASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 DEFB122-202ENST00000569013 197 ntBASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 AC007336.1-201ENST00000576365 3828 ntBASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 MIR1273D-201ENST00000577266 86 ntBASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MBD3L4A6NDZ8 MIR367-201ENST00000362299 68 ntBASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 SNORA1B-201ENST00000362535 133 ntBASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 RNU6-296P-201ENST00000384608 107 ntBASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 SNORA31.17-201ENST00000516953 127 ntBASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 AP002004.2-201ENST00000531656 154 ntBASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 AL929325.1-201ENST00000603096 117 ntBASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 AC141273.2-201ENST00000618989 130 ntBASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
MBD3L4A6NDZ8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 SNORA4.2-201ENST00000365313 147 ntBASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 RNU6-144P-201ENST00000383951 107 ntBASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 MIR764-201ENST00000390811 85 ntBASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 SNORD58.1-201ENST00000391313 66 ntBASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 MIR1298-201ENST00000408783 112 ntBASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 RNU6-847P-201ENST00000411115 108 ntBASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 AC108210.2-201ENST00000503681 201 ntBASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 RNA5SP481-201ENST00000516814 122 ntBASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 Y_RNA.802-201ENST00000614892 130 ntBASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 MIR8054-201ENST00000620877 86 ntBASIC2.06□□□□□ -2.08
MBD3L4A6NDZ8 AC008555.8-201ENST00000623602 2168 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 Y_RNA.200-201ENST00000364018 102 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 RNU4-10P-201ENST00000364383 140 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 Y_RNA.257-201ENST00000364596 102 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 Y_RNA.262-201ENST00000364641 102 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 Y_RNA.265-201ENST00000364677 108 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 Y_RNA.304-201ENST00000365011 112 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 SNORA6-201ENST00000384033 151 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 RNU6-950P-201ENST00000384651 107 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 RNU6-440P-201ENST00000390882 105 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 COX6CP10-201ENST00000416832 224 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 HSPE1P9-201ENST00000440046 311 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 STAG3L5P-204ENST00000443759 179 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 RNU7-34P-201ENST00000459394 64 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 AL049830.1-201ENST00000468034 425 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 AL358944.1-201ENST00000528537 144 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 AC004486.1-201ENST00000546846 233 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 AC009779.6-201ENST00000603972 165 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 AL365265.1-201ENST00000621045 234 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 AC068700.1-201ENST00000565862 3754 ntBASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
MBD3L4A6NDZ8 Y_RNA.199-201ENST00000364014 102 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 RNU6-1318P-201ENST00000365389 103 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 SNORA8.3-201ENST00000384679 139 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 RN7SKP200-201ENST00000410564 320 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 RNU6-383P-201ENST00000410864 94 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 Y_RNA.626-201ENST00000411288 95 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 AC244636.1-201ENST00000421152 228 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 AC100767.1-201ENST00000528178 123 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 MIR4724-201ENST00000579485 89 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 MIR6895-201ENST00000613497 78 ntBASIC2.04□□□□□ -2.08
MBD3L4A6NDZ8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 SNORD114-1-201ENST00000362705 72 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 Y_RNA.203-201ENST00000364106 102 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 RNY1-201ENST00000364228 113 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 RNU4-41P-201ENST00000364426 143 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 Y_RNA.308-201ENST00000365043 101 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 RNY4P28-201ENST00000365281 93 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 RPL23AP6-201ENST00000446637 472 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 snoU13.27-201ENST00000459278 104 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 MIR4709-201ENST00000577272 72 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 AC130289.1-201ENST00000577321 73 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 AC011921.3-201ENST00000605540 361 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms