Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MTND5P20-201ENST00000448677 143 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 SUMO1P2-201ENST00000452524 304 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-911P-201ENST00000516523 104 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.702-201ENST00000516843 96 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 RN7SKP88-201ENST00000516847 250 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-1116P-201ENST00000517269 99 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 AP002004.2-201ENST00000531656 154 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 FAM106DP-201ENST00000586416 501 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 AL117336.2-201ENST00000602435 335 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 7SK.8-201ENST00000612110 250 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 7SK.11-201ENST00000615477 250 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 7SK.13-201ENST00000622040 250 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.27-201ENST00000362540 103 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 RNU4-41P-201ENST00000364426 143 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.315-201ENST00000365117 102 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-1310P-201ENST00000384153 107 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.446-201ENST00000384178 104 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 RNU2-61P-201ENST00000411069 191 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 Z98949.2-201ENST00000440996 144 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 AC093019.1-201ENST00000443135 252 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 HSPE1P13-201ENST00000451143 297 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 AC233266.1-201ENST00000454518 96 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 AC005176.2-201ENST00000596933 147 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 AL162424.1-201ENST00000602325 221 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 SNORA28-201ENST00000606769 126 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 AC004832.4-201ENST00000608952 331 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 AC242852.1-201ENST00000612151 96 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 AC244015.1-201ENST00000622301 99 ntBASIC1.03□□□□□ -2.24
SMIM28A0A1B0GU29 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.5-201ENST00000362334 102 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 SNORD114-7-201ENST00000362520 77 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 RNU6-626P-201ENST00000363354 107 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.187-201ENST00000363918 113 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 MIR520G-201ENST00000385064 90 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 AL162725.1-201ENST00000435405 301 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.661-201ENST00000516003 99 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 RNU6-155P-201ENST00000516347 100 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 RNU4-77P-201ENST00000516692 156 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 VN1R91P-201ENST00000594377 169 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 SNORD58B-201ENST00000607313 66 ntBASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
SMIM28A0A1B0GU29 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 RNU6-199P-201ENST00000362954 107 ntBASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.146-201ENST00000363549 102 ntBASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.428-201ENST00000384078 102 ntBASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 MTCO2P27-201ENST00000420740 428 ntBASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 RPS29P1-201ENST00000465274 159 ntBASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 AL049830.1-201ENST00000468034 425 ntBASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 RNU6-436P-201ENST00000516171 114 ntBASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 SNORD116.3-201ENST00000517176 78 ntBASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.804-201ENST00000615262 101 ntBASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.01□□□□□ -2.25
SMIM28A0A1B0GU29 SNORA70.7-201ENST00000384159 133 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.570-201ENST00000384750 101 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 MIR526A1-201ENST00000384897 85 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 MIR518E-201ENST00000385252 88 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 MIR653-201ENST00000385279 96 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 RNA5SP482-201ENST00000391269 118 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 SNORA25.10-201ENST00000515926 124 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 MIR4423-201ENST00000580922 80 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 MIR5188-201ENST00000583467 113 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 AC092447.9-201ENST00000603395 144 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 AC022441.3-201ENST00000605737 136 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 MIR8065-201ENST00000620577 100 ntBASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.80-201ENST00000362996 102 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 RNU4-73P-201ENST00000363164 141 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.355-201ENST00000365462 98 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.485-201ENST00000384395 102 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 MIR562-201ENST00000384894 95 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.579-201ENST00000390939 94 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 MTND1P14-201ENST00000427400 950 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 AC104332.1-201ENST00000440471 797 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 MTND3P22-201ENST00000510932 243 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 RNU7-40P-201ENST00000516397 64 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 RNU7-28P-201ENST00000516759 62 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 MIR4795-201ENST00000584182 89 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 SNORA4-201ENST00000584302 138 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 AC006380.1-201ENST00000603598 186 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 AL591926.4-201ENST00000616895 298 ntBASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.99□□□□□ -2.25
SMIM28A0A1B0GU29 RNU6-324P-201ENST00000363957 106 ntBASIC0.98□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.252-201ENST00000364556 101 ntBASIC0.98□□□□□ -2.25
SMIM28A0A1B0GU29 RNU6-1175P-201ENST00000365200 107 ntBASIC0.98□□□□□ -2.25
SMIM28A0A1B0GU29 RNU11-5P-201ENST00000391216 129 ntBASIC0.98□□□□□ -2.25
SMIM28A0A1B0GU29 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.98□□□□□ -2.25
SMIM28A0A1B0GU29 RNU7-12P-201ENST00000516030 62 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms