Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 uc_338.11-201ENST00000619132 160 ntBASIC-0.77□□□□□ -2.53
TRAV2A0A0B4J234 AL158209.2-201ENST00000619266 216 ntBASIC-0.77□□□□□ -2.53
TRAV2A0A0B4J234 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.77□□□□□ -2.53
TRAV2A0A0B4J234 MIR6828-201ENST00000636181 60 ntBASIC-0.77□□□□□ -2.53
TRAV2A0A0B4J234 RNU6-161P-201ENST00000363051 106 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 RNY4P34-201ENST00000364779 95 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 RNU6-480P-201ENST00000384332 107 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 MIR501-201ENST00000390204 84 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 MCFD2P1-201ENST00000417812 300 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 MTCO2P27-201ENST00000420740 428 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 SNRPGP10-201ENST00000432323 225 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 HMGN2P32-201ENST00000444648 269 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 AC091959.1-201ENST00000495857 238 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 MIR4791-201ENST00000607666 84 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 MIR6740-201ENST00000618268 113 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 AC006504.8-201ENST00000621046 635 ntBASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.78□□□□□ -2.53
TRAV2A0A0B4J234 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.78□□□□□ -2.54
TRAV2A0A0B4J234 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-636P-201ENST00000384598 107 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 MIR518F-201ENST00000384973 87 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 MIR1265-201ENST00000408444 86 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-855P-201ENST00000410395 104 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-325P-201ENST00000411132 105 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 MIR18B-201ENST00000454574 71 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 AC114755.3-201ENST00000481111 251 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 AC006380.1-201ENST00000603598 186 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 AC022306.2-201ENST00000617563 647 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 AC072046.2-201ENST00000618366 268 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 AC009248.2-201ENST00000619826 254 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 AL162726.3-218ENST00000636401 95 ntBASIC-0.79□□□□□ -2.54
TRAV2A0A0B4J234 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 SNORD95.1-201ENST00000364099 68 ntBASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-280P-201ENST00000364145 104 ntBASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 RNU2-72P-201ENST00000411175 163 ntBASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 MTCO1P5-201ENST00000433573 344 ntBASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 AC093303.1-201ENST00000514549 295 ntBASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 RNU7-181P-201ENST00000517234 74 ntBASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 RNU1-29P-201ENST00000606574 126 ntBASIC-0.8□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 MIR153-2-201ENST00000385225 87 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-131P-201ENST00000391144 107 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 U8.17-201ENST00000391292 132 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 AC074198.2-201ENST00000508153 258 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 AC010486.3-201ENST00000511602 785 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 RNA5SP47-201ENST00000517230 109 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 AL137161.1-201ENST00000532231 390 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 AP000811.1-201ENST00000603803 651 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 AC018714.1-201ENST00000605028 208 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 AL138960.2-201ENST00000625145 535 ntBASIC-0.81□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 SNORD38C-201ENST00000384381 69 ntBASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-35P-201ENST00000384530 107 ntBASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-159P-201ENST00000391080 106 ntBASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 MIR873-201ENST00000401120 77 ntBASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 HMGN1P33-201ENST00000432945 451 ntBASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 AL157687.1-201ENST00000554853 619 ntBASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 AC087685.1-201ENST00000587507 141 ntBASIC-0.82□□□□□ -2.54
TRAV2A0A0B4J234 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-108P-201ENST00000365558 107 ntBASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-83P-201ENST00000384568 112 ntBASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 MIR215-201ENST00000384858 110 ntBASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 GMFBP1-201ENST00000467831 427 ntBASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-138P-201ENST00000515952 107 ntBASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 AC121247.2-201ENST00000604776 136 ntBASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 U6.115-201ENST00000636045 103 ntBASIC-0.83□□□□□ -2.54
TRAV2A0A0B4J234 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.84□□□□□ -2.54
TRAV2A0A0B4J234 SNORD114-11-201ENST00000363738 75 ntBASIC-0.84□□□□□ -2.54
TRAV2A0A0B4J234 SNORA63C-201ENST00000364578 129 ntBASIC-0.84□□□□□ -2.54
TRAV2A0A0B4J234 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.84□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-933P-201ENST00000384424 107 ntBASIC-0.84□□□□□ -2.54
TRAV2A0A0B4J234 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.84□□□□□ -2.54
TRAV2A0A0B4J234 RPL21P38-201ENST00000418090 167 ntBASIC-0.84□□□□□ -2.54
TRAV2A0A0B4J234 AC133104.1-201ENST00000429100 218 ntBASIC-0.84□□□□□ -2.54
TRAV2A0A0B4J234 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.84□□□□□ -2.54
TRAV2A0A0B4J234 SNORA25.10-201ENST00000515926 124 ntBASIC-0.84□□□□□ -2.54
TRAV2A0A0B4J234 SNORA31.14-201ENST00000516728 116 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms