Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 AC074085.1-201ENST00000413598 418 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC026782.1-201ENST00000512952 449 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-1016P-201ENST00000516689 94 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AF235103.2-201ENST00000525753 346 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC093027.1-201ENST00000546698 429 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AL512605.2-201ENST00000592972 256 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AL078603.1-201ENST00000603824 313 ntBASIC0.33□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC068700.1-201ENST00000565862 3754 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.9-201ENST00000362354 101 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.253-201ENST00000364562 112 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.301-201ENST00000364990 103 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORA36.2-201ENST00000384004 127 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR522-201ENST00000385071 87 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.594-201ENST00000410373 140 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNA5SP118-201ENST00000410385 109 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-1304P-201ENST00000411374 106 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORD123-201ENST00000459473 70 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MTND5P5-201ENST00000503764 376 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU4-57P-201ENST00000515980 135 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.682-201ENST00000516457 100 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORD45.4-201ENST00000516629 73 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU11-2P-201ENST00000516898 142 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC243829.3-201ENST00000622177 108 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.89-201ENST00000363031 102 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNY4P14-201ENST00000363656 96 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-654P-201ENST00000364373 107 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORD113.3-201ENST00000364630 78 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 snoU2-30.1-201ENST00000365012 70 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORD116-2-201ENST00000384274 95 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORD116-6-201ENST00000384711 96 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORD105-201ENST00000386910 85 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR1827-201ENST00000408549 66 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU4-49P-201ENST00000516080 140 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.670-201ENST00000516255 105 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU2-12P-201ENST00000517216 168 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR4300-201ENST00000581016 96 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC015540.1-201ENST00000615828 501 ntBASIC0.31□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-1301P-201ENST00000362724 104 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.194-201ENST00000363985 102 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORA2B-201ENST00000384583 137 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-1050P-201ENST00000410388 107 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC005534.2-201ENST00000431047 433 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MTND1P4-201ENST00000435196 415 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 HMGN2P32-201ENST00000444648 269 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-1132P-201ENST00000459214 107 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-408P-201ENST00000515910 100 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORA25.10-201ENST00000515926 124 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC022616.4-201ENST00000522985 181 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC024909.2-201ENST00000553035 286 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC006380.1-201ENST00000603598 186 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC004467.1-201ENST00000615678 330 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR4251-201ENST00000635819 61 ntBASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.3□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC134026.1-201ENST00000623249 2239 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 SNORD18A-201ENST00000363753 72 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU4-75P-201ENST00000364621 146 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-593P-201ENST00000364716 112 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU1-133P-201ENST00000364867 167 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.295-201ENST00000364918 102 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNY1P8-201ENST00000383970 114 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNU6-131P-201ENST00000391144 107 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AL031003.1-201ENST00000404229 172 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RNA5SP95-201ENST00000410319 137 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MRPS18CP6-201ENST00000423587 223 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MTND2P22-201ENST00000444325 1033 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AL392103.1-201ENST00000447000 198 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.708-201ENST00000516950 96 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR6513-201ENST00000621188 64 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC008133.2-201ENST00000624540 351 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR6516-201ENST00000630554 81 ntBASIC0.29□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR1-1-201ENST00000362147 71 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.450-201ENST00000384198 113 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.554-201ENST00000384672 102 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 Y_RNA.573-201ENST00000384763 105 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR1302-7-201ENST00000408841 72 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC244023.1-201ENST00000426884 112 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 RPS3AP52-201ENST00000435639 297 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC055872.1-201ENST00000570978 278 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC242498.1-201ENST00000604134 111 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AL355073.2-201ENST00000612106 557 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR1244-1-201ENST00000612829 85 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 AC243994.1-201ENST00000618627 109 ntBASIC0.28□□□□□ -2.36
IGHV3-43A0A0B4J1X8 MIR6734-201ENST00000621166 68 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 249.8 ms