Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 MIR373-201ENST00000362273 69 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 SNORD115-30-201ENST00000364117 82 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 U8.5-201ENST00000364528 136 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.453-201ENST00000384223 109 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 SNORD115-47-201ENST00000391226 86 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 RNA5SP511-201ENST00000410487 115 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.55□□□□□ -2.32
LRRC42Q9Y546 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.55□□□□□ -2.32
LRRC42Q9Y546 AL589823.1-201ENST00000429577 183 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.55□□□□□ -2.32
LRRC42Q9Y546 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.55□□□□□ -2.32
LRRC42Q9Y546 AC093019.1-201ENST00000443135 252 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 RPL7P42-201ENST00000481005 679 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 AC114811.1-201ENST00000507207 168 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 RNU6-1053P-201ENST00000515930 101 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 RNU2-12P-201ENST00000517216 168 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 AP003716.2-201ENST00000528260 108 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.55□□□□□ -2.32
LRRC42Q9Y546 AC009229.3-201ENST00000608056 282 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 AL591926.4-201ENST00000616895 298 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
LRRC42Q9Y546 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
LRRC42Q9Y546 RNU6-1301P-201ENST00000362724 104 ntBASIC0.54□□□□□ -2.32
LRRC42Q9Y546 RNA5SP264-201ENST00000363115 107 ntBASIC0.54□□□□□ -2.32
LRRC42Q9Y546 SNORD68-201ENST00000363214 84 ntBASIC0.54□□□□□ -2.32
LRRC42Q9Y546 MIR452-201ENST00000385020 85 ntBASIC0.54□□□□□ -2.32
LRRC42Q9Y546 RPS26P5-201ENST00000418544 335 ntBASIC0.54□□□□□ -2.32
LRRC42Q9Y546 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
LRRC42Q9Y546 AC092423.1-201ENST00000430165 186 ntBASIC0.54□□□□□ -2.32
LRRC42Q9Y546 AL035398.1-201ENST00000430869 322 ntBASIC0.54□□□□□ -2.32
LRRC42Q9Y546 AL162725.1-201ENST00000435405 301 ntBASIC0.54□□□□□ -2.32
LRRC42Q9Y546 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.54□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.708-201ENST00000516950 96 ntBASIC0.54□□□□□ -2.32
LRRC42Q9Y546 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.54□□□□□ -2.32
LRRC42Q9Y546 MIR4762-201ENST00000585261 75 ntBASIC0.54□□□□□ -2.32
LRRC42Q9Y546 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.54□□□□□ -2.32
LRRC42Q9Y546 RNU6-623P-201ENST00000363143 105 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.339-201ENST00000365325 102 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 Y_RNA.404-201ENST00000383978 102 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 RNU6-601P-201ENST00000384540 107 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 MIR1298-201ENST00000408783 112 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 SNORD12B-201ENST00000410433 91 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 FABP5P4-201ENST00000437203 171 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 MTATP6P26-201ENST00000445926 662 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 MTND3P10-201ENST00000450967 341 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 RNU6-1337P-201ENST00000516525 95 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.53□□□□□ -2.32
LRRC42Q9Y546 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.53□□□□□ -2.32
LRRC42Q9Y546 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 AC104465.1-201ENST00000611365 139 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.53□□□□□ -2.32
LRRC42Q9Y546 MIR103A2-201ENST00000362154 78 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 Y_RNA.86-201ENST00000363020 111 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 SNORD114-27-201ENST00000363766 70 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 Y_RNA.338-201ENST00000365320 114 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 RNU6-1335P-201ENST00000365426 107 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 RNU6-1310P-201ENST00000384153 107 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 MIR1185-1-201ENST00000408598 86 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 MIR548F1-201ENST00000408667 84 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.52□□□□□ -2.33
LRRC42Q9Y546 AC092989.1-201ENST00000481235 277 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 COX6CP6-201ENST00000490840 228 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 RNU7-41P-201ENST00000515917 61 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 AC055872.1-201ENST00000570978 278 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 MIR1244-1-201ENST00000612829 85 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 AC007014.2-201ENST00000615581 479 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 MIR1244-3-201ENST00000635744 85 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 MIR1244-2-201ENST00000636449 85 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 MIR1244-4-202ENST00000636813 85 ntBASIC0.52□□□□□ -2.33
LRRC42Q9Y546 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
LRRC42Q9Y546 Y_RNA.330-201ENST00000365230 109 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 RNU6-1105P-201ENST00000384774 107 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 MIR516B2-201ENST00000385190 85 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 RNU6-510P-201ENST00000391239 108 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 Y_RNA.621-201ENST00000411065 96 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 MTND3P8-201ENST00000412909 339 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 RPS20P10-201ENST00000451209 253 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 RNA5SP102-201ENST00000516865 106 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 SNORA74.3-201ENST00000517108 154 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.51□□□□□ -2.33
LRRC42Q9Y546 AC133485.1-201ENST00000567176 124 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 AC138907.6-201ENST00000568401 126 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 AC023827.1-201ENST00000569247 97 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 AC023934.1-201ENST00000574529 2389 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 AC131055.1-201ENST00000584626 316 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 SEPT14P17-201ENST00000617978 177 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 AC092794.2-201ENST00000620933 563 ntBASIC0.51□□□□□ -2.33
LRRC42Q9Y546 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.51□□□□□ -2.33
LRRC42Q9Y546 Y_RNA.88-201ENST00000363029 99 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 SNORA25.3-201ENST00000363205 127 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 RNU6-961P-201ENST00000363893 105 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 AC117470.1-201ENST00000381974 330 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 Y_RNA.482-201ENST00000384377 111 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 RNU6-1297P-201ENST00000384415 104 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 AL603825.1-201ENST00000438481 80 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.5□□□□□ -2.33
LRRC42Q9Y546 AC107399.1-201ENST00000451226 265 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 RPL17P19-201ENST00000489069 552 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 242.8 ms