Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU6-306P-201ENST00000384617 107 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 MIR573-201ENST00000384964 99 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 USMG5P1-201ENST00000425964 177 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 EIF1P2-201ENST00000428233 350 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 MTCO3P10-201ENST00000455912 772 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 ELOCP24-201ENST00000456370 334 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 SNORD123-201ENST00000459473 70 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 RNU6-256P-201ENST00000516747 97 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 AF250324.2-201ENST00000608299 610 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 MIR6863-201ENST00000636112 90 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 ZNF299P-201ENST00000406845 1804 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.12□□□□□ -2.39
HHLA3Q9XRX5 RNU6-613P-201ENST00000410412 108 ntBASIC0.12□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.621-201ENST00000411065 96 ntBASIC0.12□□□□□ -2.39
HHLA3Q9XRX5 DLGAP5P1-201ENST00000430307 464 ntBASIC0.12□□□□□ -2.39
HHLA3Q9XRX5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.12□□□□□ -2.39
HHLA3Q9XRX5 AC093027.1-201ENST00000546698 429 ntBASIC0.12□□□□□ -2.39
HHLA3Q9XRX5 AC018448.1-201ENST00000552843 316 ntBASIC0.12□□□□□ -2.39
HHLA3Q9XRX5 AC090617.3-201ENST00000573670 475 ntBASIC0.12□□□□□ -2.39
HHLA3Q9XRX5 AC007742.2-201ENST00000618226 398 ntBASIC0.12□□□□□ -2.39
HHLA3Q9XRX5 MIR18A-201ENST00000362310 71 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 RNU6-349P-201ENST00000362402 107 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 RNU6-596P-201ENST00000365395 98 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.553-201ENST00000384670 102 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 MIR522-201ENST00000385071 87 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 MTND1P4-201ENST00000435196 415 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 NDUFA4P2-201ENST00000489989 244 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 AC105313.1-201ENST00000509121 353 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 SNORA25.10-201ENST00000515926 124 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 SNORD45.4-201ENST00000516629 73 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.693-201ENST00000516641 110 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.706-201ENST00000516933 99 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 MIR4273-201ENST00000582824 84 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 MIR4760-201ENST00000585040 80 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 AC012433.1-201ENST00000588916 398 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 AC121247.2-201ENST00000604776 136 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 AC104260.1-201ENST00000616660 539 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 MIR4251-201ENST00000635819 61 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 AC010487.4-201ENST00000637027 61 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 MIR924-201ENST00000638017 53 ntBASIC0.11□□□□□ -2.39
HHLA3Q9XRX5 SNORD114-7-201ENST00000362520 77 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 RNU6-1059P-201ENST00000363752 98 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.796-201ENST00000364268 102 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.243-201ENST00000364481 109 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.799-201ENST00000364992 102 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 SNORD116-11-201ENST00000383882 92 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.498-201ENST00000384460 102 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.508-201ENST00000384502 114 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 MIR15B-201ENST00000385045 98 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 DEFB108C-201ENST00000400154 252 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 AC074133.1-201ENST00000515696 183 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 AC006362.1-201ENST00000567392 174 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 AL162730.1-201ENST00000605734 292 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 AC100812.1-201ENST00000607622 580 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 AC015726.2-201ENST00000620112 122 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 MIR3674-201ENST00000636576 68 ntBASIC0.1□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.48-201ENST00000362710 103 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 SNORD44.1-201ENST00000363202 61 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 Y_RNA.168-201ENST00000363740 102 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 Y_RNA.256-201ENST00000364594 104 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 Y_RNA.361-201ENST00000365515 120 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 Y_RNA.490-201ENST00000384413 102 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 Y_RNA.530-201ENST00000384587 101 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 SNORD28B-201ENST00000390993 75 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 RNU6-780P-201ENST00000391030 104 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 MTCO3P40-201ENST00000392516 676 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 AC005534.2-201ENST00000431047 433 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 SEPT14P3-201ENST00000439401 183 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 AL732372.2-207ENST00000445840 183 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 SEPT14P2-201ENST00000453405 183 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 snoU13.21-201ENST00000459368 105 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 SEPT14P4-201ENST00000513445 186 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 RNU6-1337P-201ENST00000516525 95 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 Y_RNA.717-201ENST00000517106 92 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 FO082796.1-201ENST00000523795 183 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 MIR4431-201ENST00000579990 94 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 MIR548AR-201ENST00000582191 57 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 AL355073.2-201ENST00000612106 557 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 MTND5P26-201ENST00000426018 1752 ntBASIC0.09□□□□□ -2.4
HHLA3Q9XRX5 RNY1P16-201ENST00000363063 111 ntBASIC0.08□□□□□ -2.4
HHLA3Q9XRX5 Y_RNA.253-201ENST00000364562 112 ntBASIC0.08□□□□□ -2.4
HHLA3Q9XRX5 RNU6-842P-201ENST00000384269 107 ntBASIC0.08□□□□□ -2.4
HHLA3Q9XRX5 MIR520H-201ENST00000385126 88 ntBASIC0.08□□□□□ -2.4
HHLA3Q9XRX5 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
HHLA3Q9XRX5 RNA5SP475-201ENST00000410568 110 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms