Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC099677.2-201ENST00000436385 175 ntBASIC2.16□□□□□ -2.06
VPS4AQ9UN37 RPS20P10-201ENST00000451209 253 ntBASIC2.16□□□□□ -2.06
VPS4AQ9UN37 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS4AQ9UN37 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS4AQ9UN37 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.16□□□□□ -2.06
VPS4AQ9UN37 AC097462.1-201ENST00000514125 324 ntBASIC2.16□□□□□ -2.06
VPS4AQ9UN37 RNU6-1041P-201ENST00000516254 102 ntBASIC2.16□□□□□ -2.06
VPS4AQ9UN37 RNU6-388P-201ENST00000517012 105 ntBASIC2.16□□□□□ -2.06
VPS4AQ9UN37 RNU6-389P-201ENST00000517048 105 ntBASIC2.16□□□□□ -2.06
VPS4AQ9UN37 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.16□□□□□ -2.06
VPS4AQ9UN37 MIR5007-201ENST00000583098 95 ntBASIC2.16□□□□□ -2.06
VPS4AQ9UN37 AC005786.1-201ENST00000588553 154 ntBASIC2.16□□□□□ -2.06
VPS4AQ9UN37 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS4AQ9UN37 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS4AQ9UN37 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
VPS4AQ9UN37 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
VPS4AQ9UN37 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VPS4AQ9UN37 RNU6-1272P-201ENST00000362776 107 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 Y_RNA.117-201ENST00000363294 101 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 SNORD27-201ENST00000363981 72 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 Y_RNA.257-201ENST00000364596 102 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 RNU6-1289P-201ENST00000384431 106 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 RNU6-417P-201ENST00000384712 107 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 AL355497.1-201ENST00000406262 551 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 AL139156.1-201ENST00000412785 841 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 CST2P1-201ENST00000425770 87 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 RNU4-71P-201ENST00000516258 113 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 MIR4438-201ENST00000585271 93 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 AC078899.2-201ENST00000595282 212 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 AC009779.6-201ENST00000603972 165 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 AC078938.1-201ENST00000620993 318 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 snoU18.1-201ENST00000629629 71 ntBASIC2.15□□□□□ -2.07
VPS4AQ9UN37 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VPS4AQ9UN37 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.15□□□□□ -2.07
VPS4AQ9UN37 Y_RNA.4-201ENST00000362333 112 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 RNU6-23P-201ENST00000363283 107 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 Y_RNA.269-201ENST00000364685 89 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 RNU6-407P-201ENST00000365280 104 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 Y_RNA.341-201ENST00000365341 102 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 RNU6-1318P-201ENST00000365389 103 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 SNORA72.4-201ENST00000384174 132 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 SNORD116-13-201ENST00000384408 92 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 Y_RNA.552-201ENST00000384665 112 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 SNORA26.5-201ENST00000391215 123 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 MIR1253-201ENST00000408273 105 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 EBAG9P1-201ENST00000418955 543 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 AC010154.1-201ENST00000425857 269 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 RNU7-99P-201ENST00000516271 62 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.14□□□□□ -2.07
VPS4AQ9UN37 AC004832.4-201ENST00000608952 331 ntBASIC2.14□□□□□ -2.07
VPS4AQ9UN37 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS4AQ9UN37 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS4AQ9UN37 RNY4P28-201ENST00000365281 93 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 RNU6-1323P-201ENST00000384025 107 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 MIR515-2-201ENST00000384883 83 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 MIR515-1-201ENST00000384884 83 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 RNU6-763P-201ENST00000390865 106 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 RNA5SP465-201ENST00000391195 109 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 RNU6-855P-201ENST00000410395 104 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 AL162725.1-201ENST00000435405 301 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 COX6CP14-201ENST00000469580 174 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 RPS26P45-201ENST00000471748 340 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 RPS27P22-201ENST00000478056 241 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 AC104435.1-201ENST00000483483 166 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 RPS27P21-201ENST00000486977 252 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 AC108729.3-201ENST00000513484 108 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS4AQ9UN37 AC027419.1-201ENST00000522976 328 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 AL008718.3-201ENST00000610217 321 ntBASIC2.13□□□□□ -2.07
VPS4AQ9UN37 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS4AQ9UN37 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS4AQ9UN37 AL356292.1-201ENST00000283110 373 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS4AQ9UN37 Y_RNA.54-201ENST00000362766 105 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 RNA5SP467-201ENST00000391274 118 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 AC018634.1-201ENST00000437554 401 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS4AQ9UN37 AC024995.1-201ENST00000523014 93 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 AC015720.1-201ENST00000565251 277 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS4AQ9UN37 MIR4448-201ENST00000584360 86 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 AC007229.1-201ENST00000590455 412 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 AL442067.1-201ENST00000613261 223 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
VPS4AQ9UN37 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS4AQ9UN37 RNU6-862P-201ENST00000362804 105 ntBASIC2.11□□□□□ -2.07
VPS4AQ9UN37 SNORD115-3-201ENST00000363100 82 ntBASIC2.11□□□□□ -2.07
VPS4AQ9UN37 RNU6-211P-201ENST00000384047 107 ntBASIC2.11□□□□□ -2.07
VPS4AQ9UN37 AC104332.1-201ENST00000440471 797 ntBASIC2.11□□□□□ -2.07
VPS4AQ9UN37 U8.19-201ENST00000459095 133 ntBASIC2.11□□□□□ -2.07
VPS4AQ9UN37 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS4AQ9UN37 MIR514B-201ENST00000516774 80 ntBASIC2.11□□□□□ -2.07
VPS4AQ9UN37 RNU7-172P-201ENST00000517125 64 ntBASIC2.11□□□□□ -2.07
VPS4AQ9UN37 RNU2-19P-201ENST00000517288 84 ntBASIC2.11□□□□□ -2.07
VPS4AQ9UN37 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms