Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.67□□□□□ -2.14
CLIP2Q9UDT6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.67□□□□□ -2.14
CLIP2Q9UDT6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.67□□□□□ -2.14
CLIP2Q9UDT6 AC093023.1-201ENST00000547375 507 ntBASIC1.67□□□□□ -2.14
CLIP2Q9UDT6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.67□□□□□ -2.14
CLIP2Q9UDT6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.67□□□□□ -2.14
CLIP2Q9UDT6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.67□□□□□ -2.14
CLIP2Q9UDT6 AL391987.6-201ENST00000305671 199 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 Y_RNA.20-201ENST00000362479 113 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 Y_RNA.416-201ENST00000384014 113 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 Y_RNA.439-201ENST00000384119 94 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 RNU6-281P-201ENST00000384212 103 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 Y_RNA.581-201ENST00000391017 97 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 RNU6-493P-201ENST00000391321 108 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 SNORD12B-201ENST00000410433 91 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 RNU6-847P-201ENST00000411115 108 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 AC004965.1-201ENST00000413033 213 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 AC005002.2-201ENST00000438228 269 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 TRMT112P2-201ENST00000512910 132 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 AP002001.1-203ENST00000534002 267 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 RRN3P3-201ENST00000549207 578 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 AC141273.2-201ENST00000618989 130 ntBASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CLIP2Q9UDT6 MIR424-201ENST00000362227 98 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 RNU6-1266P-201ENST00000362794 105 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 U8.1-201ENST00000362843 134 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.150-201ENST00000363562 102 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 RNU6-873P-201ENST00000363833 107 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 RNU6-209P-201ENST00000384118 107 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.446-201ENST00000384178 104 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.526-201ENST00000384572 110 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.552-201ENST00000384665 112 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 MIR329-1-201ENST00000385028 80 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 RNU1-139P-201ENST00000391307 165 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 MRPL35P1-201ENST00000404272 572 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 AC004866.1-201ENST00000411748 78 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 AC010409.1-201ENST00000487382 476 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.676-201ENST00000516393 96 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 RNU6-58P-201ENST00000517143 103 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 MIR4781-201ENST00000585250 76 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 MIR7974-201ENST00000615835 79 ntBASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 SNORD115-32-201ENST00000364079 82 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.319-201ENST00000365138 92 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 SNORD78.2-201ENST00000391076 69 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 RNU6-159P-201ENST00000391080 106 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 AC010531.2-201ENST00000465012 153 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 RNU6-1114P-201ENST00000516022 107 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 SNORD116-28-201ENST00000516123 91 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 SUMO2P18-201ENST00000518873 252 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 DEFB131C-201ENST00000528817 165 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 AC026470.2-201ENST00000561492 181 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 AC009779.6-201ENST00000603972 165 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 MZT1P2-201ENST00000604387 248 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.64□□□□□ -2.15
CLIP2Q9UDT6 AC068700.1-201ENST00000565862 3754 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 RNU1-62P-201ENST00000362599 164 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 SNORD81.1-201ENST00000363064 77 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 RNU6-112P-201ENST00000363599 104 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 SNORA18.2-201ENST00000383865 132 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.418-201ENST00000384029 102 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 RNU6-20P-201ENST00000384106 107 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 MIR153-2-201ENST00000385225 87 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 PCNPP3-201ENST00000393579 471 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 MIR300-201ENST00000401138 83 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 MRPS10P1-201ENST00000448483 130 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 SNORA31.17-201ENST00000516953 127 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 AC022559.1-201ENST00000520905 205 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 RPL21P9-201ENST00000556149 474 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 MIR3145-201ENST00000580727 82 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 AC011921.3-201ENST00000605540 361 ntBASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.63□□□□□ -2.15
CLIP2Q9UDT6 ZNF204P-201ENST00000416749 2397 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 MIR335-201ENST00000362173 94 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 Y_RNA.101-201ENST00000363154 102 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 RNU6-626P-201ENST00000363354 107 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 RNU6-727P-201ENST00000363592 107 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 RNU6-740P-201ENST00000364734 105 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 RNU6-200P-201ENST00000364743 107 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 RNU6-439P-201ENST00000384188 106 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 RNU6-1145P-201ENST00000384246 107 ntBASIC1.62□□□□□ -2.15
CLIP2Q9UDT6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms