Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 MT-TL1-201ENST00000386347 75 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 U8.16-201ENST00000391279 133 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 RNU6-876P-201ENST00000391295 104 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 MTCO3P19-201ENST00000415864 321 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 AC018865.2-201ENST00000423631 129 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 RPL23AP50-201ENST00000434149 455 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 RPL17P19-201ENST00000489069 552 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 OR9P1P-201ENST00000496431 281 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 SNORA40.9-201ENST00000515895 93 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 RNA5SP20-201ENST00000515976 84 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 RNU6-947P-201ENST00000516264 106 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 RNU7-28P-201ENST00000516759 62 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 AC092794.1-201ENST00000612734 582 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 U6.115-201ENST00000636045 103 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 RNU6-1301P-201ENST00000362724 104 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 SNORD81.2-201ENST00000365153 76 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 SNORA80D-201ENST00000384488 135 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.505-201ENST00000384489 102 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 MIR562-201ENST00000384894 95 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 SNORD12B-201ENST00000410433 91 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.646-201ENST00000410980 101 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 MTND1P2-201ENST00000430604 821 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 RPL39P39-201ENST00000455840 151 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 RNU6-625P-201ENST00000459412 107 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 AC022493.2-201ENST00000506122 481 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 AC074133.1-201ENST00000515696 183 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.691-201ENST00000516611 103 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 AC091178.2-201ENST00000584401 117 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 U6atac.1-201ENST00000616025 117 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 AC087588.2-201ENST00000617667 426 ntBASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
KLHL28Q9NXS3 AC005592.1-201ENST00000566527 1640 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 MIR410-201ENST00000362222 80 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 RNY3P11-201ENST00000364153 102 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.267-201ENST00000364679 109 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 RNU6-136P-201ENST00000384663 107 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 RNU6-370P-201ENST00000411008 104 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 AL137792.2-201ENST00000443484 235 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 AC093850.1-201ENST00000454121 251 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 MIR2053-201ENST00000459295 91 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 RPS26P48-201ENST00000491713 339 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 RNU6-1291P-201ENST00000516591 104 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 RNU6-63P-201ENST00000516690 95 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 AC090142.3-201ENST00000519012 385 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 RPL21P9-201ENST00000556149 474 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 AC055872.1-201ENST00000570978 278 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 AC005899.2-201ENST00000584353 90 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 MIR3674-201ENST00000636576 68 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 TPTEP1-208ENST00000636884 213 ntBASIC0.79□□□□□ -2.28
KLHL28Q9NXS3 SNORA1B-201ENST00000362535 133 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.166-201ENST00000363730 102 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 RNU6-1188P-201ENST00000363795 107 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 RNU6-961P-201ENST00000363893 105 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 RNU6-117P-201ENST00000365415 107 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 RNU6-969P-201ENST00000383900 105 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 RNU6-310P-201ENST00000384655 107 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 MTCYBP4-201ENST00000401524 249 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 UBE2V1P7-201ENST00000446395 340 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 RPL30P15-201ENST00000457129 321 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 RNU2-56P-201ENST00000516826 190 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 RNU6-341P-201ENST00000516973 96 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 AC136628.3-201ENST00000521868 290 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 AC005828.6-201ENST00000606610 232 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 AC022306.2-201ENST00000617563 647 ntBASIC0.78□□□□□ -2.28
KLHL28Q9NXS3 RNU6-926P-201ENST00000384075 107 ntBASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 Y_RNA.474-201ENST00000384341 102 ntBASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 RNU6-376P-201ENST00000384731 106 ntBASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 RNU6-1156P-201ENST00000410365 100 ntBASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 RNA5SP475-201ENST00000410568 110 ntBASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 MTCO3P10-201ENST00000455912 772 ntBASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 Y_RNA.635-201ENST00000459041 101 ntBASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 RNU6-408P-201ENST00000515910 100 ntBASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 RNU6-197P-201ENST00000516680 100 ntBASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
KLHL28Q9NXS3 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms