Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 RNU6-85P-201ENST00000605989 107 ntBASIC-0.86□□□□□ -2.55
MRPL40Q9NQ50 AC009159.2-201ENST00000617603 606 ntBASIC-0.86□□□□□ -2.55
MRPL40Q9NQ50 RNY1P12-201ENST00000364251 105 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 RNU6-407P-201ENST00000365280 104 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 SNORA20B-201ENST00000384220 132 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 SNORD70.1-201ENST00000391007 85 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 RNU6-735P-201ENST00000410612 107 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 AC018865.2-201ENST00000423631 129 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 RNU7-62P-201ENST00000458856 62 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 RNA5SP20-201ENST00000515976 84 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 SNORA18.4-201ENST00000516440 124 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 AGGF1P4-201ENST00000568249 801 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 MIR3925-201ENST00000584674 77 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 AC080013.3-201ENST00000606839 578 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 uc_338.28-201ENST00000612082 187 ntBASIC-0.87□□□□□ -2.55
MRPL40Q9NQ50 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 SNORA25.7-201ENST00000364375 127 ntBASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 RNU6-136P-201ENST00000384663 107 ntBASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 MIR563-201ENST00000385080 79 ntBASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 POLR2KP2-201ENST00000438155 177 ntBASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 MTND2P32-201ENST00000521584 1038 ntBASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 AC018448.1-201ENST00000552843 316 ntBASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 MIR4762-201ENST00000585261 75 ntBASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.88□□□□□ -2.55
MRPL40Q9NQ50 MIR655-201ENST00000362159 97 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 RNU6-811P-201ENST00000384069 107 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 RNU6-533P-201ENST00000384144 107 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 AC018710.1-201ENST00000506509 158 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 PRDX4P1-201ENST00000507189 574 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 SNORA25.14-201ENST00000516481 132 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 SNORD45.4-201ENST00000516629 73 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 MTND1P35-201ENST00000526739 508 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 MIR4263-201ENST00000584745 83 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 MIR548AD-201ENST00000584780 82 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 AL590491.3-201ENST00000610731 82 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 uc_338.11-201ENST00000619132 160 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 AC091304.10-201ENST00000641554 121 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 AC010332.2-201ENST00000613083 1904 ntBASIC-0.89□□□□□ -2.55
MRPL40Q9NQ50 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 SNORD73A-201ENST00000386062 65 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 RPL21P38-201ENST00000418090 167 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 AC092447.3-201ENST00000426027 686 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 MTCO2P11-201ENST00000431069 680 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 RNU7-185P-201ENST00000459215 60 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 AC046134.1-201ENST00000514454 666 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 AP001328.1-201ENST00000528550 176 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 Z94722.1-201ENST00000604328 474 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 uc_338.4-201ENST00000616635 176 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 AC013437.2-201ENST00000639587 677 ntBASIC-0.9□□□□□ -2.55
MRPL40Q9NQ50 RNU6-931P-201ENST00000363850 107 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 SNORD115-8-201ENST00000363856 82 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 SNORD115-38-201ENST00000365037 82 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 SNORA51.10-201ENST00000384418 136 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 AC244250.2-201ENST00000418731 148 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 AC091144.1-201ENST00000519573 138 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 CR383656.4-201ENST00000546909 122 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 MTND4P33-201ENST00000556706 766 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 NAMPTP3-201ENST00000569273 224 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 AC016597.2-201ENST00000613256 341 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 MTND1P7-201ENST00000632801 297 ntBASIC-0.91□□□□□ -2.56
MRPL40Q9NQ50 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 MIR1257-201ENST00000408490 117 ntBASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 AL358934.1-201ENST00000432346 324 ntBASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 AL137792.2-201ENST00000443484 235 ntBASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 MIR3681-201ENST00000580089 72 ntBASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 AC104010.1-201ENST00000616889 150 ntBASIC-0.92□□□□□ -2.56
MRPL40Q9NQ50 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.93□□□□□ -2.56
MRPL40Q9NQ50 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.93□□□□□ -2.56
MRPL40Q9NQ50 MTATP6P26-201ENST00000445926 662 ntBASIC-0.93□□□□□ -2.56
MRPL40Q9NQ50 MIR18B-201ENST00000454574 71 ntBASIC-0.93□□□□□ -2.56
MRPL40Q9NQ50 RNA5SP47-201ENST00000517230 109 ntBASIC-0.93□□□□□ -2.56
MRPL40Q9NQ50 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.93□□□□□ -2.56
MRPL40Q9NQ50 MIR148A-201ENST00000362215 68 ntBASIC-0.94□□□□□ -2.56
MRPL40Q9NQ50 SNORA27.1-201ENST00000362604 124 ntBASIC-0.94□□□□□ -2.56
MRPL40Q9NQ50 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.94□□□□□ -2.56
MRPL40Q9NQ50 RNU6-117P-201ENST00000365415 107 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 244.2 ms