Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RNU6-559P-201ENST00000516151 98 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 RNU6-1337P-201ENST00000516525 95 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 RNU6-307P-201ENST00000516743 106 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.8□□□□□ -2.28
HMG20AQ9NP66 AC090049.2-201ENST00000550377 109 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.8□□□□□ -2.28
HMG20AQ9NP66 AC080078.3-201ENST00000605407 463 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 BX284668.6-201ENST00000606899 438 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 GHRLOS.1-201ENST00000610995 70 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.8□□□□□ -2.28
HMG20AQ9NP66 AC027335.2-201ENST00000624030 375 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 AC091895.1-201ENST00000624494 256 ntBASIC0.8□□□□□ -2.28
HMG20AQ9NP66 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
HMG20AQ9NP66 Y_RNA.361-201ENST00000365515 120 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 SNORD116-13-201ENST00000384408 92 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 MIR526A1-201ENST00000384897 85 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 MIR625-201ENST00000385047 85 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 RNU6-1199P-201ENST00000411249 104 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 AL354751.2-201ENST00000415471 210 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 PIGPP3-201ENST00000425307 415 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 HSPE1P13-201ENST00000451143 297 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 ELOCP24-201ENST00000456370 334 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 RNU6-264P-201ENST00000517134 104 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 MIR3684-201ENST00000579779 74 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 MIR5690-201ENST00000583739 73 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 AL355073.2-201ENST00000612106 557 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 AC012676.2-201ENST00000619258 186 ntBASIC0.79□□□□□ -2.28
HMG20AQ9NP66 MIR222-201ENST00000384992 110 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 MIR559-201ENST00000385188 96 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
HMG20AQ9NP66 RNA5SP482-201ENST00000391269 118 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.78□□□□□ -2.28
HMG20AQ9NP66 AC138393.2-201ENST00000414742 246 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.78□□□□□ -2.28
HMG20AQ9NP66 RBMX2P4-201ENST00000441256 376 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 RPS4XP11-201ENST00000446897 772 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 snoU13.25-201ENST00000458945 104 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 COX6CP14-201ENST00000469580 174 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 SNORA25.10-201ENST00000515926 124 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 SNORA20.3-201ENST00000516880 132 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 SNORA70.22-201ENST00000517160 124 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 MIR3124-201ENST00000582636 67 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 AC138305.3-201ENST00000624988 240 ntBASIC0.78□□□□□ -2.28
HMG20AQ9NP66 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.77□□□□□ -2.29
HMG20AQ9NP66 SNORD68-201ENST00000363214 84 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 RNU6-626P-201ENST00000363354 107 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 RNU6-392P-201ENST00000364926 101 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 Y_RNA.314-201ENST00000365114 102 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 RNU6-20P-201ENST00000384106 107 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 SNORD116-29-201ENST00000384516 83 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 AL031003.1-201ENST00000404229 172 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 Y_RNA.605-201ENST00000410577 105 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 Y_RNA.621-201ENST00000411065 96 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 AC098614.3-201ENST00000438957 440 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 AC245047.7-201ENST00000440265 293 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 RPS23P4-201ENST00000487908 423 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 RNU6-277P-201ENST00000516272 106 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 RNU7-28P-201ENST00000516759 62 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 MIR2355-201ENST00000517199 87 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 AC113139.1-201ENST00000605049 239 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 AL359821.1-201ENST00000605519 182 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 AL008636.1-201ENST00000625038 1018 ntBASIC0.77□□□□□ -2.29
HMG20AQ9NP66 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.77□□□□□ -2.29
HMG20AQ9NP66 MIR337-201ENST00000362281 93 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 RNU4-79P-201ENST00000362764 141 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 RNU6-1283P-201ENST00000365314 105 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 SNORA2.2-201ENST00000365473 135 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 RNU6-1310P-201ENST00000384153 107 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 MIR520G-201ENST00000385064 90 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 AL451046.2-201ENST00000403074 277 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 RNU6-1054P-201ENST00000411293 104 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.76□□□□□ -2.29
HMG20AQ9NP66 AL162725.1-201ENST00000435405 301 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 Y_RNA.653-201ENST00000459091 95 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 RPS26P48-201ENST00000491713 339 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 AC114811.1-201ENST00000507207 168 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.76□□□□□ -2.29
HMG20AQ9NP66 SNORD116-28-201ENST00000516123 91 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 RNU6-699P-201ENST00000517081 110 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 AC136932.1-201ENST00000574771 208 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 MIR4659A-201ENST00000580269 81 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 FAM106DP-201ENST00000586416 501 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 AL096861.1-201ENST00000610899 123 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 AC025253.1-201ENST00000613623 543 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 AC084781.2-201ENST00000615568 161 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 AC240442.1-201ENST00000616055 283 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 AL591926.4-201ENST00000616895 298 ntBASIC0.76□□□□□ -2.29
HMG20AQ9NP66 Y_RNA.338-201ENST00000365320 114 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 Y_RNA.446-201ENST00000384178 104 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 MIR562-201ENST00000384894 95 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 MIR532-201ENST00000385025 91 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 RNU2-54P-201ENST00000410299 190 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 AC002429.1-201ENST00000437672 148 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.75□□□□□ -2.29
HMG20AQ9NP66 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.75□□□□□ -2.29
HMG20AQ9NP66 SNORD124-201ENST00000459577 104 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 RNU6-436P-201ENST00000516171 114 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 RNU6-1012P-201ENST00000516606 109 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms