Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL358934.1-201ENST00000432346 324 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 AC079354.2-201ENST00000453523 154 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 AL158211.1-201ENST00000566763 763 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 MIR548AR-201ENST00000582191 57 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 MIR1295B-201ENST00000636144 60 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 SNORD113-6-201ENST00000363345 75 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 RNU6-996P-201ENST00000365438 107 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 SNORA8.2-201ENST00000384372 139 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 RNY3P9-201ENST00000384727 106 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 MIR760-201ENST00000390220 80 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 MTND3P23-201ENST00000431980 347 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 AL356010.1-201ENST00000456364 102 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 RNU7-102P-201ENST00000458948 62 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 AC091144.1-201ENST00000519573 138 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 MIR3612-201ENST00000579753 87 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 AC090897.1-201ENST00000580909 226 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 AC090616.2-202ENST00000584248 222 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 AC005176.2-201ENST00000596933 147 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 FAM157A-202ENST00000615155 405 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 AL591926.4-201ENST00000616895 298 ntBASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.15□□□□□ -2.43
KIAA1549Q9HCM3 FGF7P2-201ENST00000332473 296 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 RNA5SP517-201ENST00000364724 117 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 RNU4-9P-201ENST00000364951 139 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 SNORA20B-201ENST00000384220 132 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-790P-201ENST00000384479 105 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 MIR450B-201ENST00000401182 78 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 MIR1265-201ENST00000408444 86 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 PDCL2P1-201ENST00000419302 352 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 AC073464.1-201ENST00000429823 534 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 AC005042.3-201ENST00000453230 174 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 RNA5SP227-201ENST00000516184 113 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 MTND2P38-201ENST00000522536 667 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 MIR4743-201ENST00000584576 69 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 AC103705.1-201ENST00000619013 241 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 AL162376.1-201ENST00000624117 175 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 AC005609.4-201ENST00000625071 447 ntBASIC-0.16□□□□□ -2.44
KIAA1549Q9HCM3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-580P-201ENST00000365159 107 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-302P-201ENST00000365249 107 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-46P-201ENST00000383860 107 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 MIR517A-201ENST00000385001 87 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU2-59P-201ENST00000410482 191 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 MTCO2P8-201ENST00000412213 658 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 MLLT10P1-201ENST00000418346 262 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-782P-201ENST00000516852 104 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 MRPS36P3-201ENST00000519284 130 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 MTND1P8-201ENST00000571424 950 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 AC090617.3-201ENST00000573670 475 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 MIR5696-201ENST00000578474 85 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 POLR3GP2-201ENST00000588366 668 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 POLR3GP1-201ENST00000594073 261 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 AC073534.2-201ENST00000620377 381 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 AC079248.2-201ENST00000623779 326 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU4-73P-201ENST00000363164 141 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-205P-201ENST00000390858 107 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-131P-201ENST00000391144 107 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 MCFD2P1-201ENST00000417812 300 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 MTND2P18-201ENST00000419962 1030 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 AC091885.1-201ENST00000506658 268 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-758P-201ENST00000516292 89 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 AC007494.3-201ENST00000624660 743 ntBASIC-0.17□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-923P-201ENST00000364753 107 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 SNORD14C-201ENST00000365382 88 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-117P-201ENST00000365415 107 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 AL354751.2-201ENST00000415471 210 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 MTCO2P30-201ENST00000503662 364 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-107P-201ENST00000516643 102 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 MIR4771-2-201ENST00000577758 74 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 MIR4771-1-201ENST00000582617 74 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 MIR6740-201ENST00000618268 113 ntBASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.18□□□□□ -2.44
KIAA1549Q9HCM3 MIR377-201ENST00000362145 69 ntBASIC-0.19□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-815P-201ENST00000384080 113 ntBASIC-0.19□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-269P-201ENST00000391077 97 ntBASIC-0.19□□□□□ -2.44
KIAA1549Q9HCM3 RNU6-602P-201ENST00000411155 105 ntBASIC-0.19□□□□□ -2.44
KIAA1549Q9HCM3 AL390729.2-201ENST00000416137 156 ntBASIC-0.19□□□□□ -2.44
KIAA1549Q9HCM3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms