Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.87□□□□□ -2.27
RANBP3Q9H6Z4 MIR4661-201ENST00000582720 75 ntBASIC0.87□□□□□ -2.27
RANBP3Q9H6Z4 AC005899.2-201ENST00000584353 90 ntBASIC0.87□□□□□ -2.27
RANBP3Q9H6Z4 AC080078.3-201ENST00000605407 463 ntBASIC0.87□□□□□ -2.27
RANBP3Q9H6Z4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.87□□□□□ -2.27
RANBP3Q9H6Z4 AC011476.5-201ENST00000615594 130 ntBASIC0.87□□□□□ -2.27
RANBP3Q9H6Z4 AC004467.1-201ENST00000615678 330 ntBASIC0.87□□□□□ -2.27
RANBP3Q9H6Z4 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.87□□□□□ -2.27
RANBP3Q9H6Z4 AC098679.4-201ENST00000624241 654 ntBASIC0.87□□□□□ -2.27
RANBP3Q9H6Z4 TPTEP1-208ENST00000636884 213 ntBASIC0.87□□□□□ -2.27
RANBP3Q9H6Z4 SNORD68-201ENST00000363214 84 ntBASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 Y_RNA.248-201ENST00000364501 109 ntBASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 RNU6-117P-201ENST00000365415 107 ntBASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 RNA5SP511-201ENST00000410487 115 ntBASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 Y_RNA.619-201ENST00000410951 90 ntBASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 ELOCP24-201ENST00000456370 334 ntBASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 AC116353.2-201ENST00000505332 712 ntBASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 AC090049.2-201ENST00000550377 109 ntBASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.86□□□□□ -2.27
RANBP3Q9H6Z4 MIRLET7C-201ENST00000362160 84 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 RNU4-79P-201ENST00000362764 141 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 Y_RNA.279-201ENST00000364763 95 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 RNU6-890P-201ENST00000384121 107 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 Y_RNA.508-201ENST00000384502 114 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 MIR526A1-201ENST00000384897 85 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 MIR653-201ENST00000385279 96 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 MT-TL1-201ENST00000386347 75 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 SNORA69.1-201ENST00000390904 137 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 RNA5SP482-201ENST00000391269 118 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 AL354751.2-201ENST00000415471 210 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 Z98949.2-201ENST00000440996 144 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 RNU6-322P-201ENST00000516010 103 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 SNORA31.4-201ENST00000516049 129 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 FAM106DP-201ENST00000586416 501 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 AL020996.3-201ENST00000606617 222 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 AC087588.2-201ENST00000617667 426 ntBASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
RANBP3Q9H6Z4 MIR410-201ENST00000362222 80 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 Y_RNA.122-201ENST00000363331 96 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 SNORD81.2-201ENST00000365153 76 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 SNORD116-13-201ENST00000384408 92 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 MIR625-201ENST00000385047 85 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 RNU11-5P-201ENST00000391216 129 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 Y_RNA.592-201ENST00000410274 109 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 RNU6-1156P-201ENST00000410365 100 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 RNU5A-5P-201ENST00000411054 116 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 MRPS18CP6-201ENST00000423587 223 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 MTND4P28-201ENST00000426217 387 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 AC096644.2-201ENST00000429278 159 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 RPS4XP11-201ENST00000446897 772 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 RNU6-1337P-201ENST00000516525 95 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 RNU6-264P-201ENST00000517134 104 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 MIR3684-201ENST00000579779 74 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 AC005828.6-201ENST00000606610 232 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 U6atac.1-201ENST00000616025 117 ntBASIC0.84□□□□□ -2.27
RANBP3Q9H6Z4 Y_RNA.101-201ENST00000363154 102 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 RNU6-1188P-201ENST00000363795 107 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 RNU6-324P-201ENST00000363957 106 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 SNORD115-30-201ENST00000364117 82 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 Y_RNA.243-201ENST00000364481 109 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 SNORD114-22-201ENST00000365423 72 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 RNU6-163P-201ENST00000384396 106 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 MIR562-201ENST00000384894 95 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 MIR520G-201ENST00000385064 90 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 MTND1P2-201ENST00000430604 821 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 FGF7P6-202ENST00000451282 293 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 RPL39P39-201ENST00000455840 151 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 MTCO3P10-201ENST00000455912 772 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 snoU13.18-201ENST00000459483 104 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 SNORD111.1-201ENST00000516421 86 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 Y_RNA.691-201ENST00000516611 103 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 RNU6-113P-201ENST00000516653 101 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 RNU7-28P-201ENST00000516759 62 ntBASIC0.83□□□□□ -2.28
RANBP3Q9H6Z4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 Y_RNA.172-201ENST00000363765 102 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 SNORA2.2-201ENST00000365473 135 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 AL031003.1-201ENST00000404229 172 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 Y_RNA.605-201ENST00000410577 105 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 POLR2J4-204ENST00000418424 324 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 AC063976.4-201ENST00000421971 163 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 RNU6-559P-201ENST00000516151 98 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 RNU2-12P-201ENST00000517216 168 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 AC120024.3-201ENST00000603167 156 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 AL078603.1-201ENST00000603824 313 ntBASIC0.82□□□□□ -2.28
RANBP3Q9H6Z4 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 225.9 ms