Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
EBF3Q9H4W6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
EBF3Q9H4W6 MIRLET7G-201ENST00000362280 84 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.24-201ENST00000362508 103 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 Y_RNA.368-201ENST00000365547 113 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 SNORA20-201ENST00000384662 132 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 RPS20P10-201ENST00000451209 253 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.28□□□□□ -2.04
EBF3Q9H4W6 RNU6-561P-201ENST00000516222 102 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 RNU6-313P-201ENST00000516317 112 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 RNU6-62P-201ENST00000516526 102 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 HSPE1P18-201ENST00000517602 280 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.28□□□□□ -2.04
EBF3Q9H4W6 AC018630.3-201ENST00000542637 96 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.28□□□□□ -2.04
EBF3Q9H4W6 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 DEFB122-202ENST00000569013 197 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 MIR4431-201ENST00000579990 94 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 MIR4744-201ENST00000581563 82 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 AC105245.1-201ENST00000581934 244 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 MIR3117-201ENST00000584034 78 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 AL356280.1-201ENST00000603614 379 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 AC012640.5-201ENST00000623897 319 ntBASIC2.28□□□□□ -2.04
EBF3Q9H4W6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
EBF3Q9H4W6 AC080128.1-201ENST00000474389 1917 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 AC010332.2-201ENST00000613083 1904 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 RNY1P11-201ENST00000363759 113 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 Y_RNA.218-201ENST00000364218 104 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 Y_RNA.287-201ENST00000364853 94 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 RNU4-11P-201ENST00000365287 132 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 RNU6-417P-201ENST00000384712 107 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 MT-TT-201ENST00000387460 66 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 SNORA40.19-201ENST00000390846 128 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 EBAG9P1-201ENST00000418955 543 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 MTND4LP9-201ENST00000427694 174 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 AC011753.1-201ENST00000451001 220 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 RNU7-141P-201ENST00000459304 62 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 AC108210.2-201ENST00000503681 201 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 RN7SKP164-201ENST00000516138 266 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 SNORA25.12-201ENST00000516202 82 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 AC109810.1-201ENST00000534066 224 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 MIR548X2-201ENST00000579776 100 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 MIR3684-201ENST00000579779 74 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 MIR3199-1-201ENST00000582434 88 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 AC008873.1-201ENST00000625051 138 ntBASIC2.27□□□□□ -2.05
EBF3Q9H4W6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
EBF3Q9H4W6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
EBF3Q9H4W6 AP006437.1-201ENST00000641440 3685 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.26□□□□□ -2.05
EBF3Q9H4W6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
EBF3Q9H4W6 Y_RNA.124-201ENST00000363339 93 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 Y_RNA.293-201ENST00000364908 93 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 RNU6-969P-201ENST00000383900 105 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 RNU6-1274P-201ENST00000384557 107 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 AL355497.1-201ENST00000406262 551 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 RNU6-855P-201ENST00000410395 104 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 TOMM22P2-201ENST00000430735 237 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.26□□□□□ -2.05
EBF3Q9H4W6 AC245047.8-201ENST00000456455 284 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 RNU6-971P-201ENST00000516920 106 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 RNU6-586P-201ENST00000517265 104 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.26□□□□□ -2.05
EBF3Q9H4W6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
EBF3Q9H4W6 AC090517.3-201ENST00000625170 141 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 MIR219B-201ENST00000637023 88 ntBASIC2.26□□□□□ -2.05
EBF3Q9H4W6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.26□□□□□ -2.05
EBF3Q9H4W6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.25□□□□□ -2.05
EBF3Q9H4W6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
EBF3Q9H4W6 U3.8-201ENST00000363675 217 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 Y_RNA.341-201ENST00000365341 102 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 SNORA8.3-201ENST00000384679 139 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 MIR218-1-201ENST00000384999 110 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 MIR95-201ENST00000385072 81 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 MIR1294-201ENST00000408503 142 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.25□□□□□ -2.05
EBF3Q9H4W6 RNU7-197P-201ENST00000458836 62 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.25□□□□□ -2.05
EBF3Q9H4W6 RNU6-1007P-201ENST00000516586 107 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.25□□□□□ -2.05
EBF3Q9H4W6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.25□□□□□ -2.05
EBF3Q9H4W6 MIR6895-201ENST00000613497 78 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 AL449363.1-201ENST00000617815 186 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 MIR5739-201ENST00000619803 80 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 MIR6132-201ENST00000622083 109 ntBASIC2.25□□□□□ -2.05
EBF3Q9H4W6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
EBF3Q9H4W6 RNU6-103P-201ENST00000363686 107 ntBASIC2.24□□□□□ -2.05
EBF3Q9H4W6 RNU6-899P-201ENST00000363947 107 ntBASIC2.24□□□□□ -2.05
EBF3Q9H4W6 Y_RNA.456-201ENST00000384232 111 ntBASIC2.24□□□□□ -2.05
EBF3Q9H4W6 SNORD20-201ENST00000384550 80 ntBASIC2.24□□□□□ -2.05
EBF3Q9H4W6 MIR616-201ENST00000385293 97 ntBASIC2.24□□□□□ -2.05
EBF3Q9H4W6 AL355796.1-201ENST00000406706 323 ntBASIC2.24□□□□□ -2.05
EBF3Q9H4W6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.24□□□□□ -2.05
EBF3Q9H4W6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.24□□□□□ -2.05
EBF3Q9H4W6 AC023141.11-201ENST00000508864 202 ntBASIC2.24□□□□□ -2.05
EBF3Q9H4W6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.24□□□□□ -2.05
EBF3Q9H4W6 DNAJC19P2-201ENST00000593340 302 ntBASIC2.24□□□□□ -2.05
EBF3Q9H4W6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms