Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC016597.2-201ENST00000613256 341 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 U8.5-201ENST00000364528 136 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 RNU6-609P-201ENST00000365459 107 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 RNU6-641P-201ENST00000384006 107 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 RNU6-224P-201ENST00000384055 107 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 RNU7-62P-201ENST00000458856 62 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 RNU7-185P-201ENST00000459215 60 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 AC006600.1-201ENST00000572529 153 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 AC137590.2-201ENST00000619709 240 ntBASIC-1.18□□□□□ -2.6
SCAPERQ9BY12 SNORD87-201ENST00000364849 89 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 MIR215-201ENST00000384858 110 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 MIR558-201ENST00000384920 94 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 AL355994.1-201ENST00000424379 260 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 PRDX4P1-201ENST00000507189 574 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 AC079140.5-201ENST00000507882 310 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 MIR5706-201ENST00000579841 80 ntBASIC-1.19□□□□□ -2.6
SCAPERQ9BY12 MIR101-2-201ENST00000362195 79 ntBASIC-1.2□□□□□ -2.6
SCAPERQ9BY12 SNORA63C-201ENST00000364578 129 ntBASIC-1.2□□□□□ -2.6
SCAPERQ9BY12 SNORD28B-201ENST00000390993 75 ntBASIC-1.2□□□□□ -2.6
SCAPERQ9BY12 MIR873-201ENST00000401120 77 ntBASIC-1.2□□□□□ -2.6
SCAPERQ9BY12 AC116353.2-201ENST00000505332 712 ntBASIC-1.2□□□□□ -2.6
SCAPERQ9BY12 AC093303.1-201ENST00000514549 295 ntBASIC-1.2□□□□□ -2.6
SCAPERQ9BY12 MTND1P5-201ENST00000517906 940 ntBASIC-1.2□□□□□ -2.6
SCAPERQ9BY12 AC138749.4-201ENST00000563970 127 ntBASIC-1.2□□□□□ -2.6
SCAPERQ9BY12 MIR4307-201ENST00000582802 84 ntBASIC-1.2□□□□□ -2.6
SCAPERQ9BY12 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 RNU6-245P-201ENST00000384020 107 ntBASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 MIR1257-201ENST00000408490 117 ntBASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 AC245008.1-201ENST00000608123 476 ntBASIC-1.21□□□□□ -2.6
SCAPERQ9BY12 RNU6-179P-201ENST00000363350 107 ntBASIC-1.22□□□□□ -2.6
SCAPERQ9BY12 RNU6-715P-201ENST00000365204 103 ntBASIC-1.22□□□□□ -2.6
SCAPERQ9BY12 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.22□□□□□ -2.6
SCAPERQ9BY12 MTCYBP36-201ENST00000404146 440 ntBASIC-1.22□□□□□ -2.6
SCAPERQ9BY12 EPS15P1-201ENST00000448836 336 ntBASIC-1.22□□□□□ -2.6
SCAPERQ9BY12 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.22□□□□□ -2.6
SCAPERQ9BY12 AC022616.6-201ENST00000520479 119 ntBASIC-1.22□□□□□ -2.6
SCAPERQ9BY12 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 SNORD28-201ENST00000384706 75 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 MCFD2P1-201ENST00000417812 300 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 AC244250.2-201ENST00000418731 148 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 USP9YP21-201ENST00000420603 432 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 AC093023.1-201ENST00000547375 507 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 MTND3P13-201ENST00000574391 343 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 AC063944.3-201ENST00000609969 533 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 SNORA51.10-201ENST00000384418 136 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 MTCO2P11-201ENST00000431069 680 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 AL358934.1-201ENST00000432346 324 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 MTCO2P29-201ENST00000465212 189 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 AC090572.1-201ENST00000519251 160 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 MIR4677-201ENST00000584153 80 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 AC022306.2-201ENST00000617563 647 ntBASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.23□□□□□ -2.61
SCAPERQ9BY12 RNU6-227P-201ENST00000362865 103 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 MIR570-201ENST00000384917 97 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 AL359672.1-201ENST00000442302 409 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 MTND4P18-201ENST00000447010 465 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 RNA5SP20-201ENST00000515976 84 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 SNORD45.4-201ENST00000516629 73 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 RNA5SP54-201ENST00000516951 92 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 SNORA25.17-201ENST00000517184 124 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 AP003168.1-201ENST00000530091 307 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 AC040926.1-201ENST00000530195 238 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 MIR4441-201ENST00000582623 100 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 MTND1P7-201ENST00000632801 297 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 AC068137.4-201ENST00000638485 296 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 AC010332.2-201ENST00000613083 1904 ntBASIC-1.24□□□□□ -2.61
SCAPERQ9BY12 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.25□□□□□ -2.61
SCAPERQ9BY12 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.25□□□□□ -2.61
SCAPERQ9BY12 SNORD115-7-201ENST00000365306 82 ntBASIC-1.25□□□□□ -2.61
SCAPERQ9BY12 RNU6-24P-201ENST00000384440 107 ntBASIC-1.25□□□□□ -2.61
SCAPERQ9BY12 MIR1285-2-201ENST00000408311 88 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms