Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AL606534.2-204ENST00000635008 178 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-626P-201ENST00000363354 107 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 SNORD48-201ENST00000364953 64 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-338P-201ENST00000383888 105 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-203P-201ENST00000384038 104 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-708P-201ENST00000384217 107 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.483-201ENST00000384380 101 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.518-201ENST00000384552 113 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-440P-201ENST00000390882 105 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-121P-201ENST00000410525 99 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 Z98949.2-201ENST00000440996 144 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 DYNLT3P2-201ENST00000442517 295 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 RNA5SP182-201ENST00000516064 82 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 MIR4422-201ENST00000581938 83 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 MIR5188-201ENST00000583467 113 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 AL512605.2-201ENST00000592972 256 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 AC011476.5-201ENST00000615594 130 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 MIR8062-201ENST00000621515 85 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 AC095038.3-201ENST00000634439 195 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 MIR6079-201ENST00000635807 62 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 U6.92-201ENST00000636464 89 ntBASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.64-201ENST00000362845 102 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.257-201ENST00000364596 102 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.389-201ENST00000383924 113 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-20P-201ENST00000384106 107 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 MIR562-201ENST00000384894 95 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 MIR1252-201ENST00000408861 65 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.618-201ENST00000410949 107 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 RNU2-14P-201ENST00000411053 191 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-130P-201ENST00000411112 103 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 SNORD127-201ENST00000458892 86 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-475P-201ENST00000516073 104 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-1143P-201ENST00000516125 104 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 AC131281.1-201ENST00000522984 164 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 CBX3P4-201ENST00000538909 354 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 DEFB122-202ENST00000569013 197 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 RAC1P9-201ENST00000604990 392 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 AC240442.1-201ENST00000616055 283 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 AC127459.3-201ENST00000624328 466 ntBASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
HERPUD2Q9BSE4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.210-201ENST00000364161 110 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 SNORA16.1-201ENST00000364597 132 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.376-201ENST00000365638 108 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.476-201ENST00000384347 108 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.562-201ENST00000384695 113 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 MIR583-201ENST00000384846 75 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 MIR9-3-201ENST00000385084 90 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 U8.13-201ENST00000390842 128 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 AL034345.1-201ENST00000407768 123 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 SDAD1P3-201ENST00000427380 333 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 snoU13.23-201ENST00000458863 104 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 SNORA70.12-201ENST00000516084 153 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.715-201ENST00000517082 110 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 RNU2-12P-201ENST00000517216 168 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 MIR3128-201ENST00000581957 66 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 MIR3124-201ENST00000582636 67 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 AL162424.1-201ENST00000602325 221 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 AL355297.3-201ENST00000604082 446 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 AC005828.6-201ENST00000606610 232 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.91□□□□□ -2.1
HERPUD2Q9BSE4 SNORD114-7-201ENST00000362520 77 ntBASIC1.9□□□□□ -2.11
HERPUD2Q9BSE4 SNORD33-201ENST00000362761 85 ntBASIC1.9□□□□□ -2.11
HERPUD2Q9BSE4 RNU1-78P-201ENST00000391248 165 ntBASIC1.9□□□□□ -2.11
HERPUD2Q9BSE4 AC004965.1-201ENST00000413033 213 ntBASIC1.9□□□□□ -2.11
HERPUD2Q9BSE4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.9□□□□□ -2.11
HERPUD2Q9BSE4 RPS26P55-201ENST00000471178 356 ntBASIC1.9□□□□□ -2.11
HERPUD2Q9BSE4 SNORA31.10-201ENST00000516482 106 ntBASIC1.9□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-295P-201ENST00000516901 104 ntBASIC1.9□□□□□ -2.11
HERPUD2Q9BSE4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.9□□□□□ -2.11
HERPUD2Q9BSE4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.60-201ENST00000362831 98 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 RNU6-770P-201ENST00000363929 105 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.230-201ENST00000364348 109 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.526-201ENST00000384572 110 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.539-201ENST00000384635 107 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 RNU2-38P-201ENST00000410856 79 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 AC098869.1-201ENST00000481627 292 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 AC079140.2-201ENST00000506193 142 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 SNORA40.14-201ENST00000516543 86 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 AC022616.4-201ENST00000522985 181 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 AC055872.1-201ENST00000570978 278 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 MIR4419B-201ENST00000577260 68 ntBASIC1.89□□□□□ -2.11
HERPUD2Q9BSE4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms