Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.78□□□□□ -2.13
RTP3Q9BQQ7 snoU2-30.2-201ENST00000362805 70 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.286-201ENST00000364813 102 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.331-201ENST00000365267 102 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.574-201ENST00000384766 95 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 SEPT14P8-201ENST00000508026 178 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 RNVU1-2-201ENST00000516326 135 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 RNU6-155P-201ENST00000516347 100 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 AC027419.1-201ENST00000522976 328 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 AP003733.2-201ENST00000529409 171 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 AC006380.1-201ENST00000603598 186 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 U6.115-201ENST00000636045 103 ntBASIC1.77□□□□□ -2.13
RTP3Q9BQQ7 RNU6-1266P-201ENST00000362794 105 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.243-201ENST00000364481 109 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 RNU6-21P-201ENST00000384710 107 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 RNU6-417P-201ENST00000384712 107 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 MIR568-201ENST00000385036 95 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 SNORA48.1-201ENST00000390879 135 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 AL355796.1-201ENST00000406706 323 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 MIR1253-201ENST00000408273 105 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 AL390729.2-201ENST00000416137 156 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 MTND3P2-201ENST00000438452 342 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 AC025465.3-201ENST00000510570 311 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 RNU6-1146P-201ENST00000516282 102 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 SNORD113-5-201ENST00000607261 78 ntBASIC1.76□□□□□ -2.13
RTP3Q9BQQ7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 snoU2_19.2-201ENST00000363024 80 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 SNORD81.1-201ENST00000363064 77 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.149-201ENST00000363558 117 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 SNORA20B-201ENST00000384220 132 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 RNU6-102P-201ENST00000384485 104 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 SNORA8-201ENST00000384574 139 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 RNU6-713P-201ENST00000384761 107 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 MIR613-201ENST00000385248 95 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 AC005042.3-201ENST00000453230 174 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 AC010598.1-201ENST00000510378 103 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 MTCO2P24-201ENST00000515611 426 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 RNA5SP220-201ENST00000516298 104 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 MIR4452-201ENST00000583004 71 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 AL078603.1-201ENST00000603824 313 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.75□□□□□ -2.13
RTP3Q9BQQ7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 RNU6-324P-201ENST00000363957 106 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 SNORD115-30-201ENST00000364117 82 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 RNU1-96P-201ENST00000364163 162 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 MTCYBP9-201ENST00000431021 303 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 HSPE1P25-201ENST00000455484 251 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 RNU6-496P-201ENST00000516145 99 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 RNU6-436P-201ENST00000516171 114 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 RNU6-570P-201ENST00000517051 105 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 MIR5094-201ENST00000578766 85 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 MIR3684-201ENST00000579779 74 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 AC005828.6-201ENST00000606610 232 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 MIR8062-201ENST00000621515 85 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.74□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.84-201ENST00000363011 104 ntBASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 SNORA33-201ENST00000363664 130 ntBASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.376-201ENST00000365638 108 ntBASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.540-201ENST00000384638 111 ntBASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.581-201ENST00000391017 97 ntBASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 RNA5SP467-201ENST00000391274 118 ntBASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 AL031003.1-201ENST00000404229 172 ntBASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 CST2P1-201ENST00000425770 87 ntBASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 SUB1P4-201ENST00000566062 339 ntBASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 AC006435.5-201ENST00000624486 112 ntBASIC1.73□□□□□ -2.13
RTP3Q9BQQ7 RNU4-90P-201ENST00000362773 141 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.329-201ENST00000365209 107 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.383-201ENST00000383855 97 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 Y_RNA.541-201ENST00000384640 113 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 AC023157.2-201ENST00000540596 141 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 AL137100.2-201ENST00000555786 315 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 MIR4713-201ENST00000582691 75 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 U6.73-201ENST00000619194 103 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 U6.108-201ENST00000637764 58 ntBASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.72□□□□□ -2.13
RTP3Q9BQQ7 SNORA27.1-201ENST00000362604 124 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms