Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MIR330-201ENST00000362196 94 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 Y_RNA.28-201ENST00000362554 111 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 snoU2-30.2-201ENST00000362805 70 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 Y_RNA.105-201ENST00000363182 111 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 SNORD115-8-201ENST00000363856 82 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 RNU6-593P-201ENST00000364716 112 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 Y_RNA.294-201ENST00000364916 102 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 SNORD115-38-201ENST00000365037 82 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 RNU6-806P-201ENST00000365147 105 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 RNU6-933P-201ENST00000384424 107 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 RNU6-1011P-201ENST00000384668 107 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 MIR1197-201ENST00000408818 88 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 RNU6-130P-201ENST00000411112 103 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 FTH1P12-201ENST00000432137 551 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 AC236972.2-201ENST00000434979 310 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.03□□□□□ -2.24
CDX2Q99626 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.03□□□□□ -2.24
CDX2Q99626 Y_RNA.631-201ENST00000459607 101 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 AP000870.1-201ENST00000472927 406 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 RPL17P19-201ENST00000489069 552 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 RNA5SP481-201ENST00000516814 122 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 AC027288.2-201ENST00000553028 243 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.03□□□□□ -2.24
CDX2Q99626 MIR4680-201ENST00000580906 66 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 MIR5188-201ENST00000583467 113 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 AC125232.2-201ENST00000592457 143 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 AC134503.1-201ENST00000633048 54 ntBASIC1.03□□□□□ -2.24
CDX2Q99626 ZNF299P-201ENST00000406845 1804 ntBASIC1.03□□□□□ -2.25
CDX2Q99626 Y_RNA.128-201ENST00000363391 112 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 RNU6-727P-201ENST00000363592 107 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 Y_RNA.314-201ENST00000365114 102 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 SNORA33.2-201ENST00000365413 134 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 RNU6-574P-201ENST00000384265 107 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 MIR10B-201ENST00000385011 110 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 RNU11-5P-201ENST00000391216 129 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 MIR190B-201ENST00000401119 79 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 MTND2P23-201ENST00000422990 651 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 TOMM22P2-201ENST00000430735 237 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 AC069257.2-201ENST00000441819 155 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 AC016717.1-201ENST00000448918 286 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 RNU7-87P-201ENST00000459343 62 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 U8.20-201ENST00000459445 131 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 RNU6-1170P-201ENST00000515974 106 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 RNU6-344P-201ENST00000516635 111 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.02□□□□□ -2.25
CDX2Q99626 AP002001.1-203ENST00000534002 267 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.02□□□□□ -2.25
CDX2Q99626 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.02□□□□□ -2.25
CDX2Q99626 AC019288.1-201ENST00000557918 224 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.02□□□□□ -2.25
CDX2Q99626 MIR5006-201ENST00000583027 110 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 MIR4753-201ENST00000585119 83 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 PART1_1.1-201ENST00000611761 217 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 MIR4272-201ENST00000635924 64 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 U6.108-201ENST00000637764 58 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 MIR6086-201ENST00000638065 55 ntBASIC1.02□□□□□ -2.25
CDX2Q99626 RNU6-490P-201ENST00000362985 107 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 Y_RNA.153-201ENST00000363615 91 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 Y_RNA.252-201ENST00000364556 101 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 SNORD87-201ENST00000364849 89 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 Y_RNA.287-201ENST00000364853 94 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 RNU6-926P-201ENST00000384075 107 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 MIR568-201ENST00000385036 95 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 Y_RNA.592-201ENST00000410274 109 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 Y_RNA.605-201ENST00000410577 105 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 RNU6-1001P-201ENST00000411265 100 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.01□□□□□ -2.25
CDX2Q99626 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.01□□□□□ -2.25
CDX2Q99626 snoU13.27-201ENST00000459278 104 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 RNU6-948P-201ENST00000516374 107 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 RNU6-58P-201ENST00000517143 103 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 DEFB108E-201ENST00000524692 240 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 AL590705.4-201ENST00000532209 134 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 AC004584.2-201ENST00000570407 410 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 MZT1P2-201ENST00000604387 248 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.01□□□□□ -2.25
CDX2Q99626 AC100821.1-201ENST00000523153 2479 ntBASIC1.01□□□□□ -2.25
CDX2Q99626 ZNF204P-201ENST00000416749 2397 ntBASIC1□□□□□ -2.25
CDX2Q99626 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.25
CDX2Q99626 AL589743.1-201ENST00000551932 2712 ntBASIC1□□□□□ -2.25
CDX2Q99626 RNU6-873P-201ENST00000363833 107 ntBASIC1□□□□□ -2.25
CDX2Q99626 Y_RNA.222-201ENST00000364264 102 ntBASIC1□□□□□ -2.25
CDX2Q99626 SNORA25.8-201ENST00000364831 128 ntBASIC1□□□□□ -2.25
CDX2Q99626 SNORA72.2-201ENST00000365028 127 ntBASIC1□□□□□ -2.25
CDX2Q99626 SNORA4.2-201ENST00000365313 147 ntBASIC1□□□□□ -2.25
CDX2Q99626 Y_RNA.431-201ENST00000384086 102 ntBASIC1□□□□□ -2.25
CDX2Q99626 RNU6-281P-201ENST00000384212 103 ntBASIC1□□□□□ -2.25
CDX2Q99626 Y_RNA.471-201ENST00000384312 102 ntBASIC1□□□□□ -2.25
CDX2Q99626 Y_RNA.577-201ENST00000384794 101 ntBASIC1□□□□□ -2.25
CDX2Q99626 MIR606-201ENST00000384851 96 ntBASIC1□□□□□ -2.25
CDX2Q99626 MIR618-201ENST00000385287 98 ntBASIC1□□□□□ -2.25
CDX2Q99626 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
CDX2Q99626 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
CDX2Q99626 RNU6-121P-201ENST00000410525 99 ntBASIC1□□□□□ -2.25
CDX2Q99626 EIF1P2-201ENST00000428233 350 ntBASIC1□□□□□ -2.25
CDX2Q99626 MTND5P22-201ENST00000458380 195 ntBASIC1□□□□□ -2.25
CDX2Q99626 AC098869.1-201ENST00000481627 292 ntBASIC1□□□□□ -2.25
CDX2Q99626 RNU6-397P-201ENST00000516226 104 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms