Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 Y_RNA.692-201ENST00000516627 105 ntBASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 MIR4513-201ENST00000581077 86 ntBASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 U6.95-201ENST00000636931 70 ntBASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 AL136360.1-201ENST00000503377 1900 ntBASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.75□□□□□ -1.97
CDK5RAP1Q96SZ6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 Y_RNA.495-201ENST00000384435 112 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 MIR548A3-201ENST00000385297 97 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 MIR767-201ENST00000390228 109 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 MIR873-201ENST00000401120 77 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 RNY4P30-201ENST00000410216 95 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 RNA5SP511-201ENST00000410487 115 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 AC108938.1-201ENST00000451204 136 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 SNORD65B-201ENST00000459126 73 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU6-437P-201ENST00000459408 95 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 UBE2DNL-203ENST00000474922 222 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU6-197P-201ENST00000516680 100 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 AL929325.1-201ENST00000603096 117 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 AL021707.8-201ENST00000609428 183 ntBASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDK5RAP1Q96SZ6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 SNORA27.1-201ENST00000362604 124 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 Y_RNA.309-201ENST00000365046 111 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 RNY3P5-201ENST00000384127 102 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 SNORA72-201ENST00000384339 132 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU1-57P-201ENST00000384491 166 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 RN7SKP101-201ENST00000411376 320 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 AC009414.1-201ENST00000427200 443 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 AC245047.4-201ENST00000433189 144 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 Y_RNA.651-201ENST00000459380 103 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 RPS26P55-201ENST00000471178 356 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 Y_RNA.690-201ENST00000516603 95 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 IGKV1-22-201ENST00000524313 326 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CDK5RAP1Q96SZ6 Z82195.2-201ENST00000612348 18351 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 Y_RNA.432-201ENST00000384087 111 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 MIR586-201ENST00000385035 97 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 SNORA79-201ENST00000408376 140 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU7-57P-201ENST00000459540 60 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 RPS26P45-201ENST00000471748 340 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 ATP5EP1-201ENST00000510257 156 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 RNU5F-4P-201ENST00000516581 114 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 AC005972.2-201ENST00000604690 348 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 AL121890.5-201ENST00000620848 304 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 MAPK10-266ENST00000641066 6555 ntBASIC2.72□□□□□ -1.97
CDK5RAP1Q96SZ6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CDK5RAP1Q96SZ6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 Y_RNA.116-201ENST00000363292 103 ntBASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 Y_RNA.120-201ENST00000363304 110 ntBASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-1323P-201ENST00000384025 107 ntBASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 Y_RNA.617-201ENST00000410920 90 ntBASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-57P-201ENST00000411348 103 ntBASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 SNORD19.2-201ENST00000516978 73 ntBASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 AC024614.2-201ENST00000577584 372 ntBASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR6817-201ENST00000615588 66 ntBASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CDK5RAP1Q96SZ6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 RNA5SP68-201ENST00000363885 119 ntBASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 SNORD32B-201ENST00000364460 84 ntBASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 SNORA68.1-201ENST00000364537 132 ntBASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 U6atac.2-201ENST00000408644 118 ntBASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU7-14P-201ENST00000459331 62 ntBASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 RNA5SP20-201ENST00000515976 84 ntBASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 AC015720.1-201ENST00000565251 277 ntBASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 AC131055.1-201ENST00000584626 316 ntBASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDK5RAP1Q96SZ6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-1080P-201ENST00000383982 107 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR27B-201ENST00000385129 97 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-750P-201ENST00000390946 107 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 Z98742.2-201ENST00000431564 187 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 Y_RNA.649-201ENST00000459077 103 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 RPL36AP48-201ENST00000485521 314 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 RPL23AP91-201ENST00000569211 455 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR3670-2-201ENST00000582974 65 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR5092-201ENST00000583139 88 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms