Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 HSPE1P25-201ENST00000455484 251 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 RNU1-92P-201ENST00000517017 135 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 MIR4438-201ENST00000585271 93 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 AC069114.2-201ENST00000604699 304 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 U1.36-201ENST00000620684 176 ntBASIC1.92□□□□□ -2.1
SIN3AQ96ST3 SNORD114-7-201ENST00000362520 77 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 snoU2_19.2-201ENST00000363024 80 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 SNORA7.1-201ENST00000363750 139 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 RNU6-407P-201ENST00000365280 104 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 SNORA8-201ENST00000384574 139 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 RPL23AP36-201ENST00000413895 458 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.91□□□□□ -2.1
SIN3AQ96ST3 RPS27P22-201ENST00000478056 241 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 RNA5SP20-201ENST00000515976 84 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 RNU6-496P-201ENST00000516145 99 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.91□□□□□ -2.1
SIN3AQ96ST3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.91□□□□□ -2.1
SIN3AQ96ST3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.91□□□□□ -2.1
SIN3AQ96ST3 RNU1-22P-201ENST00000363334 158 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 RNU6-271P-201ENST00000363858 105 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 Y_RNA.222-201ENST00000364264 102 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 Y_RNA.512-201ENST00000384518 102 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 RNU6-21P-201ENST00000384710 107 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 MIR215-201ENST00000384858 110 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 Y_RNA.581-201ENST00000391017 97 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 Y_RNA.602-201ENST00000410535 92 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 RNU2-61P-201ENST00000411069 191 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 AL158823.1-201ENST00000418441 478 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 AL358176.2-201ENST00000425769 204 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 AL731563.1-201ENST00000442202 214 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 RPS26P55-201ENST00000471178 356 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 AC097462.1-201ENST00000514125 324 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.9□□□□□ -2.11
SIN3AQ96ST3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
SIN3AQ96ST3 AL117187.1-201ENST00000555482 181 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 SNORD113-5-201ENST00000607261 78 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 AC127459.3-201ENST00000624328 466 ntBASIC1.9□□□□□ -2.11
SIN3AQ96ST3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.9□□□□□ -2.11
SIN3AQ96ST3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SIN3AQ96ST3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.89□□□□□ -2.11
SIN3AQ96ST3 RNU6-112P-201ENST00000363599 104 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 RNU6-324P-201ENST00000363957 106 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 Y_RNA.329-201ENST00000365209 107 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 RNU6-203P-201ENST00000384038 104 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 Y_RNA.459-201ENST00000384251 102 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 RNU6-505P-201ENST00000384427 107 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 RNU6-296P-201ENST00000384608 107 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 MIR515-2-201ENST00000384883 83 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 MIR515-1-201ENST00000384884 83 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 EBAG9P1-201ENST00000418955 543 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.89□□□□□ -2.11
SIN3AQ96ST3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 RPS26P45-201ENST00000471748 340 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.89□□□□□ -2.11
SIN3AQ96ST3 SEPT14P8-201ENST00000508026 178 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 RNU6-635P-201ENST00000516651 102 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 AC024995.1-201ENST00000523014 93 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 AP003733.2-201ENST00000529409 171 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.89□□□□□ -2.11
SIN3AQ96ST3 MIR3660-201ENST00000584845 100 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 PRR13P7-201ENST00000605538 430 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 AL359075.3-201ENST00000613288 217 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 AP000648.3-201ENST00000623539 4507 ntBASIC1.89□□□□□ -2.11
SIN3AQ96ST3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SIN3AQ96ST3 AC010615.1-201ENST00000594254 1764 ntBASIC1.88□□□□□ -2.11
SIN3AQ96ST3 SNORA63D-201ENST00000364359 132 ntBASIC1.88□□□□□ -2.11
SIN3AQ96ST3 RNU6-117P-201ENST00000365415 107 ntBASIC1.88□□□□□ -2.11
SIN3AQ96ST3 RNU6-1105P-201ENST00000384774 107 ntBASIC1.88□□□□□ -2.11
SIN3AQ96ST3 AL163195.1-201ENST00000496941 348 ntBASIC1.88□□□□□ -2.11
SIN3AQ96ST3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.88□□□□□ -2.11
SIN3AQ96ST3 RNU6-1143P-201ENST00000516125 104 ntBASIC1.88□□□□□ -2.11
SIN3AQ96ST3 RNU6-1045P-201ENST00000516321 107 ntBASIC1.88□□□□□ -2.11
SIN3AQ96ST3 DEFB117-201ENST00000602356 141 ntBASIC1.88□□□□□ -2.11
SIN3AQ96ST3 AC005034.5-201ENST00000604219 466 ntBASIC1.88□□□□□ -2.11
SIN3AQ96ST3 AL773524.1-201ENST00000614065 229 ntBASIC1.88□□□□□ -2.11
SIN3AQ96ST3 Y_RNA.383-201ENST00000383855 97 ntBASIC1.87□□□□□ -2.11
SIN3AQ96ST3 Y_RNA.541-201ENST00000384640 113 ntBASIC1.87□□□□□ -2.11
SIN3AQ96ST3 SNORA40.6-201ENST00000391153 128 ntBASIC1.87□□□□□ -2.11
SIN3AQ96ST3 AC009310.1-201ENST00000414414 451 ntBASIC1.87□□□□□ -2.11
SIN3AQ96ST3 AL606517.2-201ENST00000442855 241 ntBASIC1.87□□□□□ -2.11
SIN3AQ96ST3 RNU7-99P-201ENST00000516271 62 ntBASIC1.87□□□□□ -2.11
SIN3AQ96ST3 RNU1-142P-201ENST00000516682 145 ntBASIC1.87□□□□□ -2.11
SIN3AQ96ST3 RNU7-172P-201ENST00000517125 64 ntBASIC1.87□□□□□ -2.11
SIN3AQ96ST3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.87□□□□□ -2.11
SIN3AQ96ST3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.87□□□□□ -2.11
SIN3AQ96ST3 MIR3145-201ENST00000580727 82 ntBASIC1.87□□□□□ -2.11
SIN3AQ96ST3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.87□□□□□ -2.11
SIN3AQ96ST3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.87□□□□□ -2.11
SIN3AQ96ST3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.86□□□□□ -2.11
SIN3AQ96ST3 RNU6-1309P-201ENST00000363305 108 ntBASIC1.86□□□□□ -2.11
SIN3AQ96ST3 Y_RNA.172-201ENST00000363765 102 ntBASIC1.86□□□□□ -2.11
SIN3AQ96ST3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms