Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.05□□□□□ -2.24
ZNF560Q96MR9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.05□□□□□ -2.24
ZNF560Q96MR9 MIR5690-201ENST00000583739 73 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 AL117336.2-201ENST00000602435 335 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 AC004467.1-201ENST00000615678 330 ntBASIC1.05□□□□□ -2.24
ZNF560Q96MR9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
ZNF560Q96MR9 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 RNU6-833P-201ENST00000363486 107 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 Y_RNA.191-201ENST00000363972 113 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 SNORD115-30-201ENST00000364117 82 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 MT-TL1-201ENST00000386347 75 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 PDCL2P1-201ENST00000419302 352 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 RPL39P39-201ENST00000455840 151 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.04□□□□□ -2.24
ZNF560Q96MR9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF560Q96MR9 AC022306.2-201ENST00000617563 647 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 AC027279.3-201ENST00000625055 122 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 TPTEP1-208ENST00000636884 213 ntBASIC1.04□□□□□ -2.24
ZNF560Q96MR9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ZNF560Q96MR9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
ZNF560Q96MR9 RNU6-1188P-201ENST00000363795 107 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 RNU6-136P-201ENST00000384663 107 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 MIR891A-201ENST00000401237 79 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.03□□□□□ -2.24
ZNF560Q96MR9 AL162725.1-201ENST00000435405 301 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 RNU6-947P-201ENST00000516264 106 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 RNU6-113P-201ENST00000516653 101 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 RNU6-63P-201ENST00000516690 95 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 RNU7-4P-201ENST00000516961 62 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 AC136443.5-201ENST00000603741 370 ntBASIC1.03□□□□□ -2.24
ZNF560Q96MR9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ZNF560Q96MR9 RNU6-961P-201ENST00000363893 105 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 Y_RNA.248-201ENST00000364501 109 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 RNU6-310P-201ENST00000384655 107 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 RNA5SP511-201ENST00000410487 115 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 Y_RNA.646-201ENST00000410980 101 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 RNA5SP247-201ENST00000411181 105 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 AL354751.2-201ENST00000415471 210 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 ELOCP24-201ENST00000456370 334 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 LINC01399-202ENST00000458450 244 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 MTND4P17-201ENST00000470444 350 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 SNORD79.1-201ENST00000516069 84 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 AC144568.1-201ENST00000520139 137 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 AC023442.1-201ENST00000531247 422 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
ZNF560Q96MR9 AC006380.1-201ENST00000603598 186 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 MIR6767-201ENST00000637302 66 ntBASIC1.02□□□□□ -2.25
ZNF560Q96MR9 RNU1-93P-201ENST00000364704 169 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 SNORD81.2-201ENST00000365153 76 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 RNY3P4-201ENST00000384428 101 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 RNU6-876P-201ENST00000391295 104 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 RNU6-370P-201ENST00000411008 104 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 AC104332.1-201ENST00000440471 797 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 FCF1P4-201ENST00000448326 183 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 CYCTP-201ENST00000504253 315 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 RNU6-1337P-201ENST00000516525 95 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 AC136932.1-201ENST00000574771 208 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
ZNF560Q96MR9 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
ZNF560Q96MR9 SNORA80D-201ENST00000384488 135 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 RNU6-1105P-201ENST00000384774 107 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 RNU2-54P-201ENST00000410299 190 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1□□□□□ -2.25
ZNF560Q96MR9 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 MTND1P2-201ENST00000430604 821 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 AC002429.1-201ENST00000437672 148 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1□□□□□ -2.25
ZNF560Q96MR9 RNU6-120P-201ENST00000516077 103 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 AC120024.3-201ENST00000603167 156 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 AC004832.4-201ENST00000608952 331 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 AC025253.1-201ENST00000613623 543 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 AC240442.1-201ENST00000616055 283 ntBASIC1□□□□□ -2.25
ZNF560Q96MR9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
ZNF560Q96MR9 Y_RNA.363-201ENST00000365529 113 ntBASIC0.99□□□□□ -2.25
ZNF560Q96MR9 MIR1287-201ENST00000408492 90 ntBASIC0.99□□□□□ -2.25
ZNF560Q96MR9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.99□□□□□ -2.25
ZNF560Q96MR9 RPS4XP11-201ENST00000446897 772 ntBASIC0.99□□□□□ -2.25
ZNF560Q96MR9 RNU6-470P-201ENST00000515954 104 ntBASIC0.99□□□□□ -2.25
ZNF560Q96MR9 RNU6-1116P-201ENST00000517269 99 ntBASIC0.99□□□□□ -2.25
ZNF560Q96MR9 AC055872.1-201ENST00000570978 278 ntBASIC0.99□□□□□ -2.25
ZNF560Q96MR9 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
ZNF560Q96MR9 FAM106DP-201ENST00000586416 501 ntBASIC0.99□□□□□ -2.25
ZNF560Q96MR9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
ZNF560Q96MR9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.99□□□□□ -2.25
ZNF560Q96MR9 U8.5-201ENST00000364528 136 ntBASIC0.98□□□□□ -2.25
ZNF560Q96MR9 SNORD114-22-201ENST00000365423 72 ntBASIC0.98□□□□□ -2.25
ZNF560Q96MR9 RNU6-163P-201ENST00000384396 106 ntBASIC0.98□□□□□ -2.25
ZNF560Q96MR9 MIR526A1-201ENST00000384897 85 ntBASIC0.98□□□□□ -2.25
ZNF560Q96MR9 AL031003.1-201ENST00000404229 172 ntBASIC0.98□□□□□ -2.25
ZNF560Q96MR9 Y_RNA.619-201ENST00000410951 90 ntBASIC0.98□□□□□ -2.25
ZNF560Q96MR9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.98□□□□□ -2.25
ZNF560Q96MR9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
ZNF560Q96MR9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.98□□□□□ -2.25
ZNF560Q96MR9 MIR4452-201ENST00000583004 71 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms