| PGAP3 | Q96FM1 | AC092991.1-201 | ENST00000477176 | 376 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC004223.1-201 | ENST00000479840 | 271 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | RNU6-322P-201 | ENST00000516010 | 103 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC084882.1-201 | ENST00000561254 | 555 nt | TSL 4 BASIC | 1.37 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC068338.1-201 | ENST00000565567 | 176 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | MIR4778-201 | ENST00000577635 | 80 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | MIR4781-201 | ENST00000585250 | 76 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC106754.2-201 | ENST00000623006 | 233 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC138305.3-201 | ENST00000624988 | 240 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | Y_RNA.463-201 | ENST00000384271 | 102 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | RNU6-136P-201 | ENST00000384663 | 107 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | U8.16-201 | ENST00000391279 | 133 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | SDAD1P3-201 | ENST00000427380 | 333 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | LINC01755-201 | ENST00000455010 | 453 nt | TSL 2 BASIC | 1.36 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC005840.1-201 | ENST00000498412 | 377 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC100807.1-201 | ENST00000517640 | 552 nt | TSL 5 BASIC | 1.36 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC055872.1-201 | ENST00000570978 | 278 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC006600.1-201 | ENST00000572529 | 153 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | SENP7-201 | ENST00000314261 | 4736 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.36 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | Y_RNA.101-201 | ENST00000363154 | 102 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | SNORA7.1-201 | ENST00000363750 | 139 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | RNU6-324P-201 | ENST00000363957 | 106 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | Y_RNA.529-201 | ENST00000384586 | 119 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | SNORA40.6-201 | ENST00000391153 | 128 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | ZNF468-202 | ENST00000396409 | 384 nt | TSL 5 BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC096644.2-201 | ENST00000429278 | 159 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AP001043.2-201 | ENST00000434589 | 288 nt | TSL 3 BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | TRMT112P2-201 | ENST00000512910 | 132 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | RNU7-12P-201 | ENST00000516030 | 62 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | RNU6-155P-201 | ENST00000516347 | 100 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | RNU6-1337P-201 | ENST00000516525 | 95 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | RNU6-63P-201 | ENST00000516690 | 95 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AL160236.1-201 | ENST00000556317 | 195 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | ST7-AS1_1.1-201 | ENST00000611142 | 116 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | MIR7974-201 | ENST00000615835 | 79 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | U6.92-201 | ENST00000636464 | 89 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC005592.1-201 | ENST00000566527 | 1640 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | GNPDA2-204 | ENST00000509756 | 5382 nt | APPRIS ALT1 TSL 1 (best) BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AL391987.6-201 | ENST00000305671 | 199 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | Y_RNA.39-201 | ENST00000362620 | 98 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | Y_RNA.238-201 | ENST00000364441 | 102 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | SNORA25.8-201 | ENST00000364831 | 128 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AL354751.2-201 | ENST00000415471 | 210 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AP000235.1-201 | ENST00000424017 | 479 nt | TSL 3 BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AL162725.1-201 | ENST00000435405 | 301 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC078980.1-201 | ENST00000485384 | 262 nt | TSL 2 BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC108516.1-201 | ENST00000503666 | 257 nt | TSL 2 BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | RNU6-922P-201 | ENST00000516753 | 99 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC090049.2-201 | ENST00000550377 | 109 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC019288.1-201 | ENST00000557918 | 224 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AP001178.1-201 | ENST00000584679 | 268 nt | TSL 3 BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | AC011476.5-201 | ENST00000615594 | 130 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| PGAP3 | Q96FM1 | SENP7-207 | ENST00000394095 | 4945 nt | APPRIS P3 TSL 1 (best) BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | MIR337-201 | ENST00000362281 | 93 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | Y_RNA.446-201 | ENST00000384178 | 104 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNU6-1105P-201 | ENST00000384774 | 107 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | MIR150-201 | ENST00000385048 | 84 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | MIR653-201 | ENST00000385279 | 96 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AL451046.2-201 | ENST00000403074 | 277 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNA5SP511-201 | ENST00000410487 | 115 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | CHEK2P4-201 | ENST00000450340 | 246 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNU6-976P-201 | ENST00000516086 | 111 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AP001825.1-201 | ENST00000534275 | 351 nt | TSL 2 BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | GHRLOS.1-201 | ENST00000610995 | 70 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | MIR4272-201 | ENST00000635924 | 64 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNU6-1115P-201 | ENST00000362490 | 106 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNY1P10-201 | ENST00000363268 | 113 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | SNORA2.2-201 | ENST00000365473 | 135 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | Y_RNA.621-201 | ENST00000411065 | 96 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNU2-61P-201 | ENST00000411069 | 191 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AL390729.2-201 | ENST00000416137 | 156 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AC006159.2-201 | ENST00000421965 | 692 nt | TSL 2 BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | NMTRQ-TTG12-1-201 | ENST00000467595 | 72 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | Y_RNA.661-201 | ENST00000516003 | 99 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RN7SKP295-201 | ENST00000517264 | 153 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AC104211.3-201 | ENST00000518861 | 270 nt | TSL 3 BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AC022616.4-201 | ENST00000522985 | 181 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RPS29P30-201 | ENST00000600975 | 111 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNU4-41P-201 | ENST00000364426 | 143 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | Y_RNA.327-201 | ENST00000365201 | 102 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNU1-115P-201 | ENST00000365329 | 160 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNU6-708P-201 | ENST00000384217 | 107 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | MT-TD-201 | ENST00000387419 | 68 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNU6-507P-201 | ENST00000516045 | 100 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AC092447.9-201 | ENST00000603395 | 144 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AL357312.1-201 | ENST00000603879 | 298 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AC022441.3-201 | ENST00000605737 | 136 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | Y_RNA.772-201 | ENST00000606692 | 102 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AL157834.3-201 | ENST00000615543 | 103 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AL353770.2-201 | ENST00000620024 | 78 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AC091925.1-201 | ENST00000623204 | 462 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | AC068647.2-201 | ENST00000637380 | 353 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 1.31 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNA5SP327-201 | ENST00000362494 | 101 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | Y_RNA.252-201 | ENST00000364556 | 101 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | Y_RNA.526-201 | ENST00000384572 | 110 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNU6-710P-201 | ENST00000410424 | 105 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RNU6-1199P-201 | ENST00000411249 | 104 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | KCNMA1-AS2-201 | ENST00000428936 | 427 nt | TSL 3 BASIC | 1.3 | □□□□□ -2.2 | | |
| PGAP3 | Q96FM1 | RPS4XP11-201 | ENST00000446897 | 772 nt | BASIC | 1.3 | □□□□□ -2.2 | | |