| CNRIP1 | Q96F85 | RNA5SP57-201 | ENST00000459463 | 123 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | RNU7-94P-201 | ENST00000459576 | 63 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | HMGN1P10-201 | ENST00000474557 | 553 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | CFLAR-AS1-202 | ENST00000474886 | 223 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | RPL36AP21-201 | ENST00000490372 | 323 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | RNU6-1337P-201 | ENST00000516525 | 95 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | RNA5SP481-201 | ENST00000516814 | 122 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | AP003733.2-201 | ENST00000529409 | 171 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | AL117187.1-201 | ENST00000555482 | 181 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | AC091178.2-201 | ENST00000584401 | 117 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | AC073413.2-201 | ENST00000604332 | 360 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | PI15-201 | ENST00000260113 | 6732 nt | APPRIS P1 TSL 1 (best) BASIC | 1.47 | □□□□□ -2.17 | | |
| CNRIP1 | Q96F85 | Y_RNA.64-201 | ENST00000362845 | 102 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.136-201 | ENST00000363444 | 102 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.162-201 | ENST00000363683 | 102 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | LINC00583-201 | ENST00000381010 | 387 nt | TSL 2 BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.383-201 | ENST00000383855 | 97 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.602-201 | ENST00000410535 | 92 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AL358176.2-201 | ENST00000425769 | 204 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | FAR2P3-204 | ENST00000434661 | 444 nt | TSL 2 BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | SNORD13-201 | ENST00000459299 | 104 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-327P-201 | ENST00000516270 | 127 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC090124.1-201 | ENST00000525097 | 448 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RPL21P9-201 | ENST00000556149 | 474 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | DEFB117-201 | ENST00000602356 | 141 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC103810.8-201 | ENST00000607347 | 118 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MIR6079-201 | ENST00000635807 | 62 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC245060.5-201 | ENST00000610778 | 3293 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | SLC25A46-204 | ENST00000504098 | 2345 nt | TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | SAGE1-201 | ENST00000324447 | 2952 nt | APPRIS P2 TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | TPTE2-204 | ENST00000400103 | 1652 nt | TSL 5 BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-290P-201 | ENST00000365212 | 101 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.368-201 | ENST00000365547 | 113 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MIR215-201 | ENST00000384858 | 110 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MIR676-201 | ENST00000390702 | 67 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-360P-201 | ENST00000390944 | 104 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNA5SP109-201 | ENST00000391010 | 116 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MIR1323-201 | ENST00000408090 | 73 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MTND2P23-201 | ENST00000422990 | 651 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC024067.1-201 | ENST00000426199 | 223 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AL162725.1-201 | ENST00000435405 | 301 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | POLR2KP2-201 | ENST00000438155 | 177 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | HSPE1P9-201 | ENST00000440046 | 311 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | DYNLT3P2-201 | ENST00000442517 | 295 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MTATP8P1-201 | ENST00000467115 | 207 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | CPHL1P-203 | ENST00000471823 | 523 nt | TSL 5 BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC098869.1-201 | ENST00000481627 | 292 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC108516.1-201 | ENST00000503666 | 257 nt | TSL 2 BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-1045P-201 | ENST00000516321 | 107 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC087518.1-201 | ENST00000524098 | 187 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | TRAV1-1-201 | ENST00000542354 | 392 nt | APPRIS P1 BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | BX248123.2-201 | ENST00000606318 | 124 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-661P-201 | ENST00000362409 | 107 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.172-201 | ENST00000363765 | 102 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.310-201 | ENST00000365063 | 113 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.418-201 | ENST00000384029 | 102 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.456-201 | ENST00000384232 | 111 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.541-201 | ENST00000384640 | 113 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-376P-201 | ENST00000384731 | 106 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MIR562-201 | ENST00000384894 | 95 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MIR520G-201 | ENST00000385064 | 90 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | TRAJ23-201 | ENST00000390514 | 63 nt | APPRIS P1 BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MIR764-201 | ENST00000390811 | 85 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-341P-201 | ENST00000516973 | 96 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC015720.1-201 | ENST00000565251 | 277 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC004832.4-201 | ENST00000608952 | 331 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | KTN1-204 | ENST00000395311 | 4516 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | SERPINI2-207 | ENST00000476257 | 1837 nt | APPRIS P1 TSL 5 BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MUC15-203 | ENST00000455601 | 3156 nt | APPRIS P1 TSL 2 BASIC | 1.44 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.84-201 | ENST00000363011 | 104 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.133-201 | ENST00000363428 | 110 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | SNORA4.2-201 | ENST00000365313 | 147 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.459-201 | ENST00000384251 | 102 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | SNORD116-13-201 | ENST00000384408 | 92 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-950P-201 | ENST00000384651 | 107 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.569-201 | ENST00000384749 | 103 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.574-201 | ENST00000384766 | 95 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-1105P-201 | ENST00000384774 | 107 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-1248P-201 | ENST00000391096 | 64 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNA5SP511-201 | ENST00000410487 | 115 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | LINC00428-201 | ENST00000415620 | 227 nt | TSL 5 BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC245047.3-201 | ENST00000429428 | 127 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AL591806.2-201 | ENST00000433122 | 173 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | HSPE1P21-201 | ENST00000438283 | 308 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RPS20P10-201 | ENST00000451209 | 253 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | snoU13.27-201 | ENST00000459278 | 104 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AC091021.1-201 | ENST00000468051 | 388 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | SNORA31.10-201 | ENST00000516482 | 106 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-635P-201 | ENST00000516651 | 102 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-63P-201 | ENST00000516690 | 95 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-548P-201 | ENST00000517083 | 115 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | AL358944.1-201 | ENST00000528537 | 144 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MIR3145-201 | ENST00000580727 | 82 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MIR8054-201 | ENST00000620877 | 86 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | BRCA1-202 | ENST00000354071 | 4497 nt | TSL 1 (best) BASIC | 1.42 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU4-80P-201 | ENST00000363200 | 141 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | RNU6-326P-201 | ENST00000365480 | 107 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | Y_RNA.518-201 | ENST00000384552 | 113 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CNRIP1 | Q96F85 | MIR517C-201 | ENST00000385103 | 95 nt | BASIC | 1.42 | □□□□□ -2.18 | | |