Protein–RNA interactions for Protein: Q96BQ1

FAM3D, Protein FAM3D, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3DQ96BQ1 Y_RNA.592-201ENST00000410274 109 ntBASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 FCF1P9-201ENST00000412546 282 ntBASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 AC093019.1-201ENST00000443135 252 ntBASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 Y_RNA.691-201ENST00000516611 103 ntBASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 AC136932.1-201ENST00000574771 208 ntBASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 MIR4762-201ENST00000585261 75 ntBASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
FAM3DQ96BQ1 Y_RNA.101-201ENST00000363154 102 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 Y_RNA.172-201ENST00000363765 102 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 Y_RNA.279-201ENST00000364763 95 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 AL031003.1-201ENST00000404229 172 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 PDCL2P1-201ENST00000419302 352 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 COX6CP14-201ENST00000469580 174 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 SNORA25.10-201ENST00000515926 124 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 SNORA70.12-201ENST00000516084 153 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 AC016727.1-205ENST00000605437 569 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 AC240442.1-201ENST00000616055 283 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 AC098679.4-201ENST00000624241 654 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 AL359757.2-201ENST00000624309 274 ntBASIC0.68□□□□□ -2.3
FAM3DQ96BQ1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 MIR378A-201ENST00000362177 66 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 RNU6-845P-201ENST00000362578 103 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 Y_RNA.166-201ENST00000363730 102 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 RNU6-926P-201ENST00000384075 107 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 MIR452-201ENST00000385020 85 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 SNORA69.1-201ENST00000390904 137 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 MIR1298-201ENST00000408783 112 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 RNU6-1156P-201ENST00000410365 100 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 Y_RNA.646-201ENST00000410980 101 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 RNU2-61P-201ENST00000411069 191 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 RNU7-90P-201ENST00000459216 62 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 AC005840.1-201ENST00000498412 377 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 AP003716.2-201ENST00000528260 108 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 AC011604.1-201ENST00000545978 196 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 AL353997.5-201ENST00000618886 171 ntBASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
FAM3DQ96BQ1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 RNU6-1188P-201ENST00000363795 107 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 RNU6-310P-201ENST00000384655 107 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 RNU6-1105P-201ENST00000384774 107 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 MIR625-201ENST00000385047 85 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 SNORA75.6-201ENST00000391318 127 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 MIR942-201ENST00000401111 86 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 RNU2-54P-201ENST00000410299 190 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 RNU6-1199P-201ENST00000411249 104 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 RPL30P15-201ENST00000457129 321 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 AC108210.2-201ENST00000503681 201 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 RNU6-966P-201ENST00000516479 104 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 AC090142.3-201ENST00000519012 385 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 AC068790.6-201ENST00000602558 258 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 AC211469.2-201ENST00000605461 205 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 AC027514.1-201ENST00000588561 1603 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 CASC19-280ENST00000642102 1351 ntBASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
FAM3DQ96BQ1 RNA5SP264-201ENST00000363115 107 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 RNU6-53P-201ENST00000365367 106 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 RNY3P4-201ENST00000384428 101 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 RNU6-370P-201ENST00000411008 104 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 Y_RNA.621-201ENST00000411065 96 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 RPS3AP1-201ENST00000413190 320 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 FCF1P4-201ENST00000448326 183 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 snoU13.23-201ENST00000458863 104 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 Y_RNA.635-201ENST00000459041 101 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 MIR4781-201ENST00000585250 76 ntBASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
FAM3DQ96BQ1 Y_RNA.160-201ENST00000363677 92 ntBASIC0.64□□□□□ -2.31
FAM3DQ96BQ1 RNY3P11-201ENST00000364153 102 ntBASIC0.64□□□□□ -2.31
FAM3DQ96BQ1 Y_RNA.253-201ENST00000364562 112 ntBASIC0.64□□□□□ -2.31
FAM3DQ96BQ1 AC117470.1-201ENST00000381974 330 ntBASIC0.64□□□□□ -2.31
FAM3DQ96BQ1 MIR522-201ENST00000385071 87 ntBASIC0.64□□□□□ -2.31
FAM3DQ96BQ1 MIR516B2-201ENST00000385190 85 ntBASIC0.64□□□□□ -2.31
FAM3DQ96BQ1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
FAM3DQ96BQ1 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
FAM3DQ96BQ1 RNU7-41P-201ENST00000515917 61 ntBASIC0.64□□□□□ -2.31
FAM3DQ96BQ1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.64□□□□□ -2.31
FAM3DQ96BQ1 AC015712.3-201ENST00000559380 164 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms