Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 RNU6-1105P-201ENST00000384774 107 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 Y_RNA.577-201ENST00000384794 101 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 SNORA75.2-201ENST00000391138 150 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 SNORA75.3-201ENST00000391231 150 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 Y_RNA.592-201ENST00000410274 109 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 Y_RNA.621-201ENST00000411065 96 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 FGF7P6-202ENST00000451282 293 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 snoU13.25-201ENST00000458945 104 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 MTND4P17-201ENST00000470444 350 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 AC114811.1-201ENST00000507207 168 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 Y_RNA.691-201ENST00000516611 103 ntBASIC0.76□□□□□ -2.29
UFD1Q92890 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
UFD1Q92890 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
UFD1Q92890 AL391987.6-201ENST00000305671 199 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 RNU6-845P-201ENST00000362578 103 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 Y_RNA.166-201ENST00000363730 102 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 U8.5-201ENST00000364528 136 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 RNU6-926P-201ENST00000384075 107 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 FGF7P8-201ENST00000402994 292 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 RNU6-1156P-201ENST00000410365 100 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.75□□□□□ -2.29
UFD1Q92890 RPEP5-201ENST00000441137 268 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 AC093019.1-201ENST00000443135 252 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 Y_RNA.635-201ENST00000459041 101 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 RNU7-90P-201ENST00000459216 62 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.75□□□□□ -2.29
UFD1Q92890 RNU6-120P-201ENST00000516077 103 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 MIR3192-201ENST00000584920 77 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 AC068790.6-201ENST00000602558 258 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 AC006380.1-201ENST00000603598 186 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 AL591926.4-201ENST00000616895 298 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 AC098679.4-201ENST00000624241 654 ntBASIC0.75□□□□□ -2.29
UFD1Q92890 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.75□□□□□ -2.29
UFD1Q92890 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
UFD1Q92890 CASC19-280ENST00000642102 1351 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 Y_RNA.279-201ENST00000364763 95 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 SNORD116-13-201ENST00000384408 92 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 MIR452-201ENST00000385020 85 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 RNU6-482P-201ENST00000391068 107 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 MIR942-201ENST00000401111 86 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 AL031003.1-201ENST00000404229 172 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 Y_RNA.646-201ENST00000410980 101 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 RNU6-370P-201ENST00000411008 104 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 FCF1P4-201ENST00000448326 183 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.74□□□□□ -2.29
UFD1Q92890 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.74□□□□□ -2.29
UFD1Q92890 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 RNU6-264P-201ENST00000517134 104 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.74□□□□□ -2.29
UFD1Q92890 AC011604.1-201ENST00000545978 196 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 MIR4762-201ENST00000585261 75 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 FAM71BP1-201ENST00000604431 523 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 AC240442.1-201ENST00000616055 283 ntBASIC0.74□□□□□ -2.29
UFD1Q92890 Y_RNA.101-201ENST00000363154 102 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 Y_RNA.160-201ENST00000363677 92 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 SNORA75.6-201ENST00000391318 127 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 MIR1298-201ENST00000408783 112 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 RNU2-54P-201ENST00000410299 190 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 PDCL2P1-201ENST00000419302 352 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 AL163540.1-201ENST00000485382 386 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 AC090142.3-201ENST00000519012 385 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
UFD1Q92890 AC016727.1-205ENST00000605437 569 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 AL359757.2-201ENST00000624309 274 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 AC091895.1-201ENST00000624494 256 ntBASIC0.73□□□□□ -2.29
UFD1Q92890 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.72□□□□□ -2.29
UFD1Q92890 RNU6-1188P-201ENST00000363795 107 ntBASIC0.72□□□□□ -2.29
UFD1Q92890 RNY3P4-201ENST00000384428 101 ntBASIC0.72□□□□□ -2.29
UFD1Q92890 RNU6-310P-201ENST00000384655 107 ntBASIC0.72□□□□□ -2.29
UFD1Q92890 MIR532-201ENST00000385025 91 ntBASIC0.72□□□□□ -2.29
UFD1Q92890 RPS3AP1-201ENST00000413190 320 ntBASIC0.72□□□□□ -2.29
UFD1Q92890 AP1B1P2-201ENST00000416196 106 ntBASIC0.72□□□□□ -2.29
UFD1Q92890 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.72□□□□□ -2.29
UFD1Q92890 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
UFD1Q92890 RNU7-4P-201ENST00000516961 62 ntBASIC0.72□□□□□ -2.29
UFD1Q92890 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
UFD1Q92890 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
UFD1Q92890 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.72□□□□□ -2.29
UFD1Q92890 TPTEP1-208ENST00000636884 213 ntBASIC0.72□□□□□ -2.29
UFD1Q92890 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
UFD1Q92890 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
UFD1Q92890 RNA5SP264-201ENST00000363115 107 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 Y_RNA.253-201ENST00000364562 112 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 RNU2-61P-201ENST00000411069 191 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 MRPS18CP6-201ENST00000423587 223 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.71□□□□□ -2.3
UFD1Q92890 RPS20P10-201ENST00000451209 253 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 RNA5SP458-201ENST00000516188 119 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 AC144568.1-201ENST00000520139 137 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 AC022616.4-201ENST00000522985 181 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.71□□□□□ -2.3
UFD1Q92890 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms