Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL513328.1-201ENST00000446460 224 ntBASIC2.68□□□□□ -1.98
ERCC4Q92889 RNU1-131P-201ENST00000458943 161 ntBASIC2.68□□□□□ -1.98
ERCC4Q92889 RPS27P22-201ENST00000478056 241 ntBASIC2.68□□□□□ -1.98
ERCC4Q92889 AC026436.1-201ENST00000510537 270 ntBASIC2.68□□□□□ -1.98
ERCC4Q92889 SCARNA8-201ENST00000515924 131 ntBASIC2.68□□□□□ -1.98
ERCC4Q92889 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.68□□□□□ -1.98
ERCC4Q92889 MIR3144-201ENST00000579460 79 ntBASIC2.68□□□□□ -1.98
ERCC4Q92889 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.68□□□□□ -1.98
ERCC4Q92889 AL353149.1-201ENST00000610667 244 ntBASIC2.68□□□□□ -1.98
ERCC4Q92889 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.68□□□□□ -1.98
ERCC4Q92889 U6.73-201ENST00000619194 103 ntBASIC2.68□□□□□ -1.98
ERCC4Q92889 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ERCC4Q92889 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ERCC4Q92889 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ERCC4Q92889 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
ERCC4Q92889 MIRLET7G-201ENST00000362280 84 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 Y_RNA.24-201ENST00000362508 103 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 MIR616-201ENST00000385293 97 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 Y_RNA.580-201ENST00000391004 95 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 MIR1262-201ENST00000408276 93 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 MIR1278-201ENST00000408753 81 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 AC009238.1-201ENST00000442165 424 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 AC009237.6-201ENST00000446969 424 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 AC091021.1-201ENST00000468051 388 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 AC010409.1-201ENST00000487382 476 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 AC005840.1-201ENST00000498412 377 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 Y_RNA.703-201ENST00000516846 111 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.67□□□□□ -1.98
ERCC4Q92889 MIR4744-201ENST00000581563 82 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 MIR4438-201ENST00000585271 93 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 POLR3GP1-201ENST00000594073 261 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 AC046143.2-201ENST00000609789 160 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 AL391903.3-201ENST00000612158 163 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 AC012640.5-201ENST00000623897 319 ntBASIC2.67□□□□□ -1.98
ERCC4Q92889 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ERCC4Q92889 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
ERCC4Q92889 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
ERCC4Q92889 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
ERCC4Q92889 RNU6-674P-201ENST00000363831 107 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 Y_RNA.182-201ENST00000363880 111 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 RNA5SP68-201ENST00000363885 119 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 SNORD114-6-201ENST00000364393 72 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 RNU6-969P-201ENST00000383900 105 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 RN7SKP284-201ENST00000411002 343 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 HMGN2P34-201ENST00000437647 269 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.66□□□□□ -1.98
ERCC4Q92889 AC011406.1-201ENST00000512440 370 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 RNU6-1278P-201ENST00000516130 107 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 RNU6-406P-201ENST00000516470 107 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 RNA5SP148-201ENST00000516527 94 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 MIR4724-201ENST00000579485 89 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 AC067747.1-201ENST00000608026 250 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 AC245884.12-201ENST00000615364 59 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 MIR6817-201ENST00000615588 66 ntBASIC2.66□□□□□ -1.98
ERCC4Q92889 AC005336.3-201ENST00000623833 2679 ntBASIC2.65□□□□□ -1.98
ERCC4Q92889 snoU2-30.2-201ENST00000362805 70 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 RNU6-774P-201ENST00000363238 107 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.65□□□□□ -1.99
ERCC4Q92889 RNU6-804P-201ENST00000384286 107 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 RNU6-578P-201ENST00000390980 103 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 EDDM3CP-201ENST00000415977 425 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 RPL23AP94-201ENST00000512518 302 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 RNU7-200P-201ENST00000516105 62 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 RNU6-453P-201ENST00000516819 85 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 RNU7-128P-201ENST00000517247 62 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 MTND5P41-201ENST00000517498 206 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 MIR3133-201ENST00000583157 78 ntBASIC2.65□□□□□ -1.99
ERCC4Q92889 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
ERCC4Q92889 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
ERCC4Q92889 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ERCC4Q92889 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ERCC4Q92889 AL596028.1-201ENST00000326971 197 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 MIR449A-201ENST00000362113 91 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 RNU4-84P-201ENST00000364200 139 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 Y_RNA.229-201ENST00000364347 113 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 SNORA72-201ENST00000384339 132 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 AL359511.1-201ENST00000402970 211 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 AL117342.1-201ENST00000404861 406 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 EBAG9P1-201ENST00000418955 543 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 RPS15AP28-201ENST00000435088 386 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 RNU6-1146P-201ENST00000516282 102 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 RNU7-172P-201ENST00000517125 64 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 MIR338-201ENST00000636369 67 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 ZNF720P1-201ENST00000562403 1939 ntBASIC2.64□□□□□ -1.99
ERCC4Q92889 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ERCC4Q92889 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.64□□□□□ -1.99
ERCC4Q92889 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ERCC4Q92889 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
ERCC4Q92889 Y_RNA.272-201ENST00000364696 102 ntBASIC2.63□□□□□ -1.99
ERCC4Q92889 RNU6-383P-201ENST00000410864 94 ntBASIC2.63□□□□□ -1.99
ERCC4Q92889 RNU6-437P-201ENST00000459408 95 ntBASIC2.63□□□□□ -1.99
ERCC4Q92889 Y_RNA.797-201ENST00000515977 94 ntBASIC2.63□□□□□ -1.99
ERCC4Q92889 AL021707.8-201ENST00000609428 183 ntBASIC2.63□□□□□ -1.99
ERCC4Q92889 AC104465.1-201ENST00000611365 139 ntBASIC2.63□□□□□ -1.99
ERCC4Q92889 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
ERCC4Q92889 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.63□□□□□ -1.99
ERCC4Q92889 ZNF658B-202ENST00000615961 3375 ntBASIC2.63□□□□□ -1.99
ERCC4Q92889 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
ERCC4Q92889 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.62□□□□□ -1.99
ERCC4Q92889 MIR367-201ENST00000362299 68 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 206.6 ms