Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 USP9YP16-201ENST00000430287 407 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 AL035398.1-201ENST00000430869 322 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 MTATP6P17-201ENST00000431030 672 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 AC104332.1-201ENST00000440471 797 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 USP9YP23-201ENST00000455085 407 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.45□□□□□ -2.34
LMX1AQ8TE12 AC098869.1-201ENST00000481627 292 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 RNU6-107P-201ENST00000516643 102 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 Y_RNA.706-201ENST00000516933 99 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.45□□□□□ -2.34
LMX1AQ8TE12 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.45□□□□□ -2.34
LMX1AQ8TE12 AC009229.3-201ENST00000608056 282 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 AC104465.1-201ENST00000611365 139 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 AC090617.10-201ENST00000624308 134 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.45□□□□□ -2.34
LMX1AQ8TE12 AC073544.1-201ENST00000600110 1595 ntBASIC0.45□□□□□ -2.34
LMX1AQ8TE12 Y_RNA.85-201ENST00000363014 111 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 RNU6-1059P-201ENST00000363752 98 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 Y_RNA.301-201ENST00000364990 103 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 RNU6-831P-201ENST00000384548 107 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 MIR190B-201ENST00000401119 79 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 MIR873-201ENST00000401120 77 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 MIR891A-201ENST00000401237 79 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.44□□□□□ -2.34
LMX1AQ8TE12 USP9YP30-201ENST00000430729 455 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 RPEP5-201ENST00000441137 268 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 PCNPP5-201ENST00000452246 481 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 SUMO1P2-201ENST00000452524 304 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 AC113410.1-201ENST00000505029 247 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 RNU6-1278P-201ENST00000516130 107 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 RNU6-1291P-201ENST00000516591 104 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 RNU6-566P-201ENST00000516790 107 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 RNA5SP330-201ENST00000517096 96 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 RNU6-1116P-201ENST00000517269 99 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 AC105029.1-201ENST00000520250 669 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.44□□□□□ -2.34
LMX1AQ8TE12 MIR4762-201ENST00000585261 75 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 AC127459.3-201ENST00000624328 466 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 AL008636.1-201ENST00000625038 1018 ntBASIC0.44□□□□□ -2.34
LMX1AQ8TE12 RNA5SP264-201ENST00000363115 107 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 RNY4P14-201ENST00000363656 96 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 RNU6-1090P-201ENST00000364065 94 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 RNU6-407P-201ENST00000365280 104 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 Y_RNA.364-201ENST00000365532 101 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 RNU6-376P-201ENST00000384731 106 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 MIR181A1-201ENST00000385026 110 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 FABP5P4-201ENST00000437203 171 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 AC233266.1-201ENST00000454518 96 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 RPS29P25-201ENST00000481709 171 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 RNU6-506P-201ENST00000516553 94 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 RNU6-1314P-201ENST00000517139 104 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 MTND2P38-201ENST00000522536 667 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 AC109635.3-201ENST00000529536 185 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 AC018448.1-201ENST00000552843 316 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 AF250324.2-201ENST00000608299 610 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 AC242852.1-201ENST00000612151 96 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 AC104260.1-201ENST00000616660 539 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 AC091925.1-201ENST00000623204 462 ntBASIC0.43□□□□□ -2.34
LMX1AQ8TE12 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.43□□□□□ -2.34
LMX1AQ8TE12 RNU6-874P-201ENST00000362390 105 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 U8.5-201ENST00000364528 136 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 RNU6-1335P-201ENST00000365426 107 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 RNU6-716P-201ENST00000365621 103 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 AC093019.1-201ENST00000443135 252 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 UQCRBP2-201ENST00000447827 297 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.42□□□□□ -2.34
LMX1AQ8TE12 U7.7-201ENST00000459276 60 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 CYCTP-201ENST00000504253 315 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.42□□□□□ -2.34
LMX1AQ8TE12 SNORD111.1-201ENST00000516421 86 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 RNU6-1096P-201ENST00000517089 102 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 MTND4LP26-201ENST00000518144 282 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 AC024909.2-201ENST00000553035 286 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 AC012557.2-201ENST00000605919 418 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 AC005014.2-201ENST00000607795 599 ntBASIC0.42□□□□□ -2.34
LMX1AQ8TE12 Y_RNA.194-201ENST00000363985 102 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 AC117470.1-201ENST00000381974 330 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 Y_RNA.402-201ENST00000383972 102 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 RNU6-318P-201ENST00000384283 103 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 RNU6-163P-201ENST00000384396 106 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 Y_RNA.557-201ENST00000384680 107 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 MIR1185-1-201ENST00000408598 86 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 RNA5SP511-201ENST00000410487 115 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.41□□□□□ -2.34
LMX1AQ8TE12 AC131055.1-201ENST00000584626 316 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 AC120024.3-201ENST00000603167 156 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 AC093913.1-201ENST00000614178 329 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 SEPT14P17-201ENST00000617978 177 ntBASIC0.41□□□□□ -2.34
LMX1AQ8TE12 Y_RNA.48-201ENST00000362710 103 ntBASIC0.4□□□□□ -2.35
LMX1AQ8TE12 RNY1P16-201ENST00000363063 111 ntBASIC0.4□□□□□ -2.35
LMX1AQ8TE12 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
LMX1AQ8TE12 Y_RNA.358-201ENST00000365491 99 ntBASIC0.4□□□□□ -2.35
LMX1AQ8TE12 Y_RNA.498-201ENST00000384460 102 ntBASIC0.4□□□□□ -2.35
LMX1AQ8TE12 MIR1298-201ENST00000408783 112 ntBASIC0.4□□□□□ -2.35
LMX1AQ8TE12 RNA5SP118-201ENST00000410385 109 ntBASIC0.4□□□□□ -2.35
LMX1AQ8TE12 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.4□□□□□ -2.35
LMX1AQ8TE12 AL358176.2-201ENST00000425769 204 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms