Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU7-175P-201ENST00000515915 61 ntBASIC0.14□□□□□ -2.39
CCDC112Q8NEF3 ACA59.1-201ENST00000515966 143 ntBASIC0.14□□□□□ -2.39
CCDC112Q8NEF3 SNORA18.7-201ENST00000516910 131 ntBASIC0.14□□□□□ -2.39
CCDC112Q8NEF3 MIR4300-201ENST00000581016 96 ntBASIC0.14□□□□□ -2.39
CCDC112Q8NEF3 AL591926.4-201ENST00000616895 298 ntBASIC0.14□□□□□ -2.39
CCDC112Q8NEF3 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 Y_RNA.405-201ENST00000383979 100 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 Y_RNA.409-201ENST00000383990 98 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 Y_RNA.451-201ENST00000384200 100 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 Y_RNA.524-201ENST00000384564 100 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 Y_RNA.561-201ENST00000384694 100 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 MIR573-201ENST00000384964 99 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 MIR873-201ENST00000401120 77 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 MTND3P23-201ENST00000431980 347 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 RNU6-1114P-201ENST00000516022 107 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 RNU6-63P-201ENST00000516690 95 ntBASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.13□□□□□ -2.39
CCDC112Q8NEF3 MIR103A1-201ENST00000362165 78 ntBASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 MIR410-201ENST00000362222 80 ntBASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 MIR329-1-201ENST00000385028 80 ntBASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 RNA5SP95-201ENST00000410319 137 ntBASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 ERLEC1P1-201ENST00000433806 578 ntBASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 MTCO3P10-201ENST00000455912 772 ntBASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 AC093023.1-201ENST00000547375 507 ntBASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 AC092954.2-201ENST00000609103 430 ntBASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 AL357075.2-201ENST00000614906 189 ntBASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 MIR2909-201ENST00000617113 69 ntBASIC0.12□□□□□ -2.39
CCDC112Q8NEF3 MIR18A-201ENST00000362310 71 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 RNU6-454P-201ENST00000364292 107 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 SNORA2B-201ENST00000384583 137 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 RNU6-613P-201ENST00000410412 108 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 RNU6-1001P-201ENST00000411265 100 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 MTND1P4-201ENST00000435196 415 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 MTATP6P13-201ENST00000438531 667 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 SNORD123-201ENST00000459473 70 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 AC125232.2-201ENST00000592457 143 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 AF250324.2-201ENST00000608299 610 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 AC019193.3-201ENST00000609144 554 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
CCDC112Q8NEF3 SNORD114-7-201ENST00000362520 77 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 SNORD44.1-201ENST00000363202 61 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 RNU6-595P-201ENST00000363944 107 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 RNU6-1145P-201ENST00000384246 107 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 Y_RNA.533-201ENST00000384596 114 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 AL354751.2-201ENST00000415471 210 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 AC074133.1-201ENST00000515696 183 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 RN7SKP298-201ENST00000515950 94 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 Y_RNA.665-201ENST00000516177 98 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 Y_RNA.695-201ENST00000516715 107 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 AC124303.1-201ENST00000605703 360 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 AC100812.1-201ENST00000607622 580 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 AC073114.1-201ENST00000612027 490 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 AC015726.2-201ENST00000620112 122 ntBASIC0.1□□□□□ -2.39
CCDC112Q8NEF3 RNU6-1252P-201ENST00000363054 104 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 Y_RNA.135-201ENST00000363439 95 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 Y_RNA.481-201ENST00000384373 102 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 MIR15B-201ENST00000385045 98 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 Y_RNA.582-201ENST00000391023 95 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 RNU6-1068P-201ENST00000410958 103 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 AC092447.3-201ENST00000426027 686 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 EIF1P2-201ENST00000428233 350 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 UQCRBP2-201ENST00000447827 297 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 AC093027.1-201ENST00000546698 429 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 ZNF519P2-201ENST00000557032 169 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 MIR3908-201ENST00000579798 126 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 Z69908.1-201ENST00000622603 247 ntBASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.09□□□□□ -2.4
CCDC112Q8NEF3 Y_RNA.243-201ENST00000364481 109 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 RNU6-596P-201ENST00000365395 98 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 Y_RNA.373-201ENST00000365600 103 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 MIR522-201ENST00000385071 87 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 AL390729.2-201ENST00000416137 156 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 USMG5P1-201ENST00000425964 177 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 USP9YP16-201ENST00000430287 407 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 USP9YP23-201ENST00000455085 407 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 ELOCP24-201ENST00000456370 334 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 RNU7-66P-201ENST00000459469 62 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 SNORD45.4-201ENST00000516629 73 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 AL158211.1-201ENST00000566763 763 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 AC090617.3-201ENST00000573670 475 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 MIR3672-201ENST00000584290 82 ntBASIC0.08□□□□□ -2.4
CCDC112Q8NEF3 MIR4251-201ENST00000635819 61 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms