Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MIR4325-201ENST00000583049 90 ntBASIC2.56□□□□□ -2
HIPK4Q8NE63 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
HIPK4Q8NE63 Y_RNA.778-201ENST00000620203 90 ntBASIC2.56□□□□□ -2
HIPK4Q8NE63 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
HIPK4Q8NE63 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HIPK4Q8NE63 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
HIPK4Q8NE63 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HIPK4Q8NE63 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
HIPK4Q8NE63 RNU6-151P-201ENST00000364158 107 ntBASIC2.55□□□□□ -2
HIPK4Q8NE63 Y_RNA.796-201ENST00000364268 102 ntBASIC2.55□□□□□ -2
HIPK4Q8NE63 SNORA67.1-201ENST00000364749 141 ntBASIC2.55□□□□□ -2
HIPK4Q8NE63 Y_RNA.799-201ENST00000364992 102 ntBASIC2.55□□□□□ -2
HIPK4Q8NE63 AL512604.1-201ENST00000404812 257 ntBASIC2.55□□□□□ -2
HIPK4Q8NE63 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.55□□□□□ -2
HIPK4Q8NE63 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
HIPK4Q8NE63 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.55□□□□□ -2
HIPK4Q8NE63 AC026271.5-201ENST00000577873 130 ntBASIC2.55□□□□□ -2
HIPK4Q8NE63 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
HIPK4Q8NE63 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.55□□□□□ -2
HIPK4Q8NE63 AC022513.1-201ENST00000624512 117 ntBASIC2.55□□□□□ -2
HIPK4Q8NE63 MIR3658-201ENST00000636291 56 ntBASIC2.55□□□□□ -2
HIPK4Q8NE63 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.55□□□□□ -2
HIPK4Q8NE63 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.55□□□□□ -2
HIPK4Q8NE63 SNORD45.3-201ENST00000363836 72 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 Y_RNA.215-201ENST00000364204 112 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 Y_RNA.587-201ENST00000391210 103 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 Y_RNA.622-201ENST00000411091 108 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 AC006461.1-201ENST00000412637 326 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 RPS15AP28-201ENST00000435088 386 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 AC099677.2-201ENST00000436385 175 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 SNRPGP8-201ENST00000454064 226 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 SNORD11-201ENST00000459124 84 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 RPS26P45-201ENST00000471748 340 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 AL049873.1-201ENST00000480540 376 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 AL049861.1-201ENST00000603130 150 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 MIR6079-201ENST00000635807 62 ntBASIC2.54□□□□□ -2
HIPK4Q8NE63 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.54□□□□□ -2
HIPK4Q8NE63 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.53□□□□□ -2
HIPK4Q8NE63 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.53□□□□□ -2
HIPK4Q8NE63 RNU6-862P-201ENST00000362804 105 ntBASIC2.53□□□□□ -2
HIPK4Q8NE63 RNU6-1209P-201ENST00000363655 107 ntBASIC2.53□□□□□ -2
HIPK4Q8NE63 RNU6-131P-201ENST00000391144 107 ntBASIC2.53□□□□□ -2
HIPK4Q8NE63 AC007064.1-201ENST00000412238 351 ntBASIC2.53□□□□□ -2
HIPK4Q8NE63 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.53□□□□□ -2
HIPK4Q8NE63 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.53□□□□□ -2
HIPK4Q8NE63 CST2P1-201ENST00000425770 87 ntBASIC2.53□□□□□ -2
HIPK4Q8NE63 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.53□□□□□ -2
HIPK4Q8NE63 RPL23AP91-201ENST00000569211 455 ntBASIC2.53□□□□□ -2
HIPK4Q8NE63 DNAJC19P2-201ENST00000593340 302 ntBASIC2.53□□□□□ -2
HIPK4Q8NE63 AC132825.6-201ENST00000638861 357 ntBASIC2.53□□□□□ -2
HIPK4Q8NE63 AC018630.2-201ENST00000534866 2403 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 AC131280.1-202ENST00000624067 4211 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 SNORD115-3-201ENST00000363100 82 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 RNU6-23P-201ENST00000363283 107 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 SNORD113-1-201ENST00000365321 69 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 RNU6-1080P-201ENST00000383982 107 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 RNU6-484P-201ENST00000384016 107 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 EEF1A1P41-201ENST00000414667 207 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.52□□□□□ -2.01
HIPK4Q8NE63 RPL23AP83-201ENST00000434984 473 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 RNA5SP367-201ENST00000516557 118 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 RNU6-1291P-201ENST00000516591 104 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 RNU1-142P-201ENST00000516682 145 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.52□□□□□ -2.01
HIPK4Q8NE63 MIR2681-201ENST00000581814 105 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
HIPK4Q8NE63 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HIPK4Q8NE63 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HIPK4Q8NE63 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HIPK4Q8NE63 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HIPK4Q8NE63 Y_RNA.337-201ENST00000365312 102 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 Y_RNA.488-201ENST00000384403 102 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 MIR515-2-201ENST00000384883 83 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 MIR515-1-201ENST00000384884 83 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 MIR562-201ENST00000384894 95 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 MIR483-201ENST00000385070 76 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 MIR569-201ENST00000385228 96 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 MIR524-201ENST00000385242 87 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 AL139132.1-201ENST00000431587 344 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 AC018634.1-201ENST00000437554 401 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 RNU6-341P-201ENST00000516973 96 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 AL031274.2-201ENST00000599419 203 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 uc_338.4-201ENST00000616635 176 ntBASIC2.51□□□□□ -2.01
HIPK4Q8NE63 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HIPK4Q8NE63 ZNF702P-202ENST00000434269 1966 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HIPK4Q8NE63 SNORA8-201ENST00000384574 139 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 Y_RNA.568-201ENST00000384742 113 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 MIR128-1-201ENST00000384921 82 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 MIR29C-201ENST00000385231 88 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 RNA5SP323-201ENST00000391094 133 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 RNU11-5P-201ENST00000391216 129 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 AL138827.1-201ENST00000402666 306 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.5□□□□□ -2.01
HIPK4Q8NE63 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 AL109933.2-201ENST00000452651 260 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 AL163195.1-201ENST00000496941 348 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 SNORD77.4-201ENST00000516158 81 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms