Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.21□□□□□ -2.22
LSMEM1Q8N8F7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.21□□□□□ -2.22
LSMEM1Q8N8F7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
LSMEM1Q8N8F7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.2□□□□□ -2.22
LSMEM1Q8N8F7 Y_RNA.101-201ENST00000363154 102 ntBASIC1.2□□□□□ -2.22
LSMEM1Q8N8F7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.2□□□□□ -2.22
LSMEM1Q8N8F7 Y_RNA.428-201ENST00000384078 102 ntBASIC1.2□□□□□ -2.22
LSMEM1Q8N8F7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.2□□□□□ -2.22
LSMEM1Q8N8F7 AC063976.4-201ENST00000421971 163 ntBASIC1.2□□□□□ -2.22
LSMEM1Q8N8F7 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
LSMEM1Q8N8F7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.2□□□□□ -2.22
LSMEM1Q8N8F7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.2□□□□□ -2.22
LSMEM1Q8N8F7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.2□□□□□ -2.22
LSMEM1Q8N8F7 Y_RNA.446-201ENST00000384178 104 ntBASIC1.19□□□□□ -2.22
LSMEM1Q8N8F7 MIR19B1-201ENST00000384829 87 ntBASIC1.19□□□□□ -2.22
LSMEM1Q8N8F7 RNY4P36-201ENST00000391116 96 ntBASIC1.19□□□□□ -2.22
LSMEM1Q8N8F7 RNU2-61P-201ENST00000411069 191 ntBASIC1.19□□□□□ -2.22
LSMEM1Q8N8F7 AL390729.2-201ENST00000416137 156 ntBASIC1.19□□□□□ -2.22
LSMEM1Q8N8F7 snoU13.23-201ENST00000458863 104 ntBASIC1.19□□□□□ -2.22
LSMEM1Q8N8F7 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
LSMEM1Q8N8F7 UBL5P1-201ENST00000507979 193 ntBASIC1.19□□□□□ -2.22
LSMEM1Q8N8F7 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
LSMEM1Q8N8F7 AL138825.1-201ENST00000618587 192 ntBASIC1.19□□□□□ -2.22
LSMEM1Q8N8F7 U8.5-201ENST00000364528 136 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 RNU6-1040P-201ENST00000383974 107 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 PIGPP3-201ENST00000425307 415 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 AC024067.1-201ENST00000426199 223 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 SNORD111.1-201ENST00000516421 86 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 SNORD116.3-201ENST00000517176 78 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 AC055872.1-201ENST00000570978 278 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 AC136932.1-201ENST00000574771 208 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 MIR4661-201ENST00000582720 75 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 AC005972.2-201ENST00000604690 348 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 MIR1302-1-201ENST00000637932 143 ntBASIC1.18□□□□□ -2.22
LSMEM1Q8N8F7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 RNY3P11-201ENST00000364153 102 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 MIR15B-201ENST00000385045 98 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 MIR764-201ENST00000390811 85 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 RBMX2P4-201ENST00000441256 376 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 SNORD79.1-201ENST00000516069 84 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 RN7SKP295-201ENST00000517264 153 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 MIR4762-201ENST00000585261 75 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 AC004832.4-201ENST00000608952 331 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 AL512598.1-201ENST00000610158 273 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 AL591926.4-201ENST00000616895 298 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 MTND4LP32-201ENST00000636111 270 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
LSMEM1Q8N8F7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 SNORD114-24-201ENST00000365029 72 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 MIR559-201ENST00000385188 96 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 SNORA17.3-201ENST00000391159 129 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 RPEP5-201ENST00000441137 268 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 AC004223.1-201ENST00000479840 271 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 AC114811.1-201ENST00000507207 168 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 RNU6-699P-201ENST00000517081 110 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 AC006600.1-201ENST00000572529 153 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 MIR4421-201ENST00000578133 69 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 AC005730.3-201ENST00000583067 366 ntBASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
LSMEM1Q8N8F7 Y_RNA.70-201ENST00000362886 110 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 MIR200A-201ENST00000384875 90 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 RPL23AP36-201ENST00000413895 458 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 RPS20P10-201ENST00000451209 253 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 AC005042.3-201ENST00000453230 174 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 RNU6-436P-201ENST00000516171 114 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 Y_RNA.718-201ENST00000517110 102 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 AC015712.3-201ENST00000559380 164 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 AC022441.3-201ENST00000605737 136 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 Y_RNA.772-201ENST00000606692 102 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 AC011476.5-201ENST00000615594 130 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 U6.92-201ENST00000636464 89 ntBASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
LSMEM1Q8N8F7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
LSMEM1Q8N8F7 SNORA72-201ENST00000384339 132 ntBASIC1.14□□□□□ -2.23
LSMEM1Q8N8F7 SNORD116-13-201ENST00000384408 92 ntBASIC1.14□□□□□ -2.23
LSMEM1Q8N8F7 MIR526A1-201ENST00000384897 85 ntBASIC1.14□□□□□ -2.23
LSMEM1Q8N8F7 MIR136-201ENST00000385207 82 ntBASIC1.14□□□□□ -2.23
LSMEM1Q8N8F7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.14□□□□□ -2.23
LSMEM1Q8N8F7 AC002429.1-201ENST00000437672 148 ntBASIC1.14□□□□□ -2.23
LSMEM1Q8N8F7 AC093019.1-201ENST00000443135 252 ntBASIC1.14□□□□□ -2.23
LSMEM1Q8N8F7 HMGN2P32-201ENST00000444648 269 ntBASIC1.14□□□□□ -2.23
LSMEM1Q8N8F7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms