Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNA5SP475-201ENST00000410568 110 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 AC063976.4-201ENST00000421971 163 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 AL606490.4-201ENST00000423117 127 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 RPL17P19-201ENST00000489069 552 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 RNU6-1213P-201ENST00000517075 94 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 AL008636.1-201ENST00000625038 1018 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 AC008163.1-202ENST00000636004 2889 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 Y_RNA.72-201ENST00000362894 103 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 RNU6-99P-201ENST00000364721 107 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 MIR1276-201ENST00000408707 83 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 AL354751.2-201ENST00000415471 210 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 MTND1P4-201ENST00000435196 415 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 MTND1P34-201ENST00000438556 671 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 HSPE1P13-201ENST00000451143 297 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 FGF7P6-202ENST00000451282 293 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 AC233266.1-201ENST00000454518 96 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 RNU6-322P-201ENST00000516010 103 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 RNU7-30P-201ENST00000516835 62 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 MIR3192-201ENST00000584920 77 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 AC242852.1-201ENST00000612151 96 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 AC244015.1-201ENST00000622301 99 ntBASIC0.83□□□□□ -2.28
CCDC65Q8IXS2 AL162725.1-201ENST00000435405 301 ntBASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 SUMO1P2-201ENST00000452524 304 ntBASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 AC005899.2-201ENST00000584353 90 ntBASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 AC011712.1-201ENST00000588959 234 ntBASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 AC136443.5-201ENST00000603741 370 ntBASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 AL357312.1-201ENST00000603879 298 ntBASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC65Q8IXS2 SNORA80D-201ENST00000384488 135 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 SNORA75.2-201ENST00000391138 150 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 SNORA75.3-201ENST00000391231 150 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 RNU7-21P-201ENST00000459430 62 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 RNU6-408P-201ENST00000515910 100 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 SNORA25.10-201ENST00000515926 124 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 RNU6-1337P-201ENST00000516525 95 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 Y_RNA.691-201ENST00000516611 103 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 AL391903.3-201ENST00000612158 163 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 AC004467.1-201ENST00000615678 330 ntBASIC0.81□□□□□ -2.28
CCDC65Q8IXS2 Y_RNA.101-201ENST00000363154 102 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 Y_RNA.172-201ENST00000363765 102 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 RNU6-1199P-201ENST00000411249 104 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 PDCL2P1-201ENST00000419302 352 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 ELOCP24-201ENST00000456370 334 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 RNU6-966P-201ENST00000516479 104 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 MIR2355-201ENST00000517199 87 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 AC023442.1-201ENST00000531247 422 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 FAM106DP-201ENST00000586416 501 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 AC120024.3-201ENST00000603167 156 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 AC027279.3-201ENST00000625055 122 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 AL669831.3-213ENST00000636676 183 ntBASIC0.8□□□□□ -2.28
CCDC65Q8IXS2 Y_RNA.4-201ENST00000362333 112 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 Y_RNA.279-201ENST00000364763 95 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 Y_RNA.336-201ENST00000365307 109 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 RNU6-1310P-201ENST00000384153 107 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 SNORD116-13-201ENST00000384408 92 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 MIR891A-201ENST00000401237 79 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 Y_RNA.592-201ENST00000410274 109 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 FCF1P9-201ENST00000412546 282 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 MTND4P28-201ENST00000426217 387 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 RPEP5-201ENST00000441137 268 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 AC093019.1-201ENST00000443135 252 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 LINC01399-202ENST00000458450 244 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 MIR2053-201ENST00000459295 91 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 MTND4P17-201ENST00000470444 350 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 CYCTP-201ENST00000504253 315 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 MIR4762-201ENST00000585261 75 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 MIR8070-201ENST00000616510 88 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 AL591926.4-201ENST00000616895 298 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 PISRT1.1-201ENST00000616930 107 ntBASIC0.79□□□□□ -2.28
CCDC65Q8IXS2 RNU6-845P-201ENST00000362578 103 ntBASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 U8.5-201ENST00000364528 136 ntBASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 RNU6-767P-201ENST00000384132 107 ntBASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 Y_RNA.646-201ENST00000410980 101 ntBASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 PIGPP3-201ENST00000425307 415 ntBASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 RPL39P39-201ENST00000455840 151 ntBASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 AC245047.8-201ENST00000456455 284 ntBASIC0.78□□□□□ -2.28
CCDC65Q8IXS2 RPL30P15-201ENST00000457129 321 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms