Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 Y_RNA.641-201ENST00000459414 105 ntBASIC2.55□□□□□ -2
RNF180Q86T96 RNA5SP458-201ENST00000516188 119 ntBASIC2.55□□□□□ -2
RNF180Q86T96 RNU4-71P-201ENST00000516258 113 ntBASIC2.55□□□□□ -2
RNF180Q86T96 MIR3668-201ENST00000582138 75 ntBASIC2.55□□□□□ -2
RNF180Q86T96 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.55□□□□□ -2
RNF180Q86T96 AC004832.4-201ENST00000608952 331 ntBASIC2.55□□□□□ -2
RNF180Q86T96 MIR219B-201ENST00000637023 88 ntBASIC2.55□□□□□ -2
RNF180Q86T96 AC068647.2-201ENST00000637380 353 ntBASIC2.55□□□□□ -2
RNF180Q86T96 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.55□□□□□ -2
RNF180Q86T96 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.65-201ENST00000362846 100 ntBASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.82-201ENST00000363000 102 ntBASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.92-201ENST00000363043 102 ntBASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.235-201ENST00000364412 102 ntBASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.306-201ENST00000365015 102 ntBASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.312-201ENST00000365089 102 ntBASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.322-201ENST00000365151 102 ntBASIC2.54□□□□□ -2
RNF180Q86T96 SNORA72.4-201ENST00000384174 132 ntBASIC2.54□□□□□ -2
RNF180Q86T96 BTF3P11-201ENST00000426582 477 ntBASIC2.54□□□□□ -2
RNF180Q86T96 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.650-201ENST00000459002 102 ntBASIC2.54□□□□□ -2
RNF180Q86T96 U8.19-201ENST00000459095 133 ntBASIC2.54□□□□□ -2
RNF180Q86T96 RN7SL297P-201ENST00000483161 293 ntBASIC2.54□□□□□ -2
RNF180Q86T96 RNU6-63P-201ENST00000516690 95 ntBASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.777-201ENST00000516982 102 ntBASIC2.54□□□□□ -2
RNF180Q86T96 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
RNF180Q86T96 MIR4282-201ENST00000583613 67 ntBASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.771-201ENST00000598668 102 ntBASIC2.54□□□□□ -2
RNF180Q86T96 Y_RNA.789-201ENST00000622480 102 ntBASIC2.54□□□□□ -2
RNF180Q86T96 AC012640.5-201ENST00000623897 319 ntBASIC2.54□□□□□ -2
RNF180Q86T96 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF180Q86T96 AC008555.8-201ENST00000623602 2168 ntBASIC2.54□□□□□ -2
RNF180Q86T96 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF180Q86T96 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
RNF180Q86T96 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RNF180Q86T96 AC018630.2-201ENST00000534866 2403 ntBASIC2.53□□□□□ -2
RNF180Q86T96 Y_RNA.122-201ENST00000363331 96 ntBASIC2.53□□□□□ -2
RNF180Q86T96 RNU6-899P-201ENST00000363947 107 ntBASIC2.53□□□□□ -2
RNF180Q86T96 Y_RNA.269-201ENST00000364685 89 ntBASIC2.53□□□□□ -2
RNF180Q86T96 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.53□□□□□ -2
RNF180Q86T96 RNU6-1323P-201ENST00000384025 107 ntBASIC2.53□□□□□ -2
RNF180Q86T96 SNORD116-13-201ENST00000384408 92 ntBASIC2.53□□□□□ -2
RNF180Q86T96 MIR221-201ENST00000385135 110 ntBASIC2.53□□□□□ -2
RNF180Q86T96 RNA5SP501-201ENST00000410990 112 ntBASIC2.53□□□□□ -2
RNF180Q86T96 HMGN2P23-201ENST00000456759 269 ntBASIC2.53□□□□□ -2
RNF180Q86T96 RPS26P45-201ENST00000471748 340 ntBASIC2.53□□□□□ -2
RNF180Q86T96 AC055731.1-201ENST00000474387 401 ntBASIC2.53□□□□□ -2
RNF180Q86T96 HMGB3P3-201ENST00000510526 400 ntBASIC2.53□□□□□ -2
RNF180Q86T96 AC009779.6-201ENST00000603972 165 ntBASIC2.53□□□□□ -2
RNF180Q86T96 AC022513.1-201ENST00000624512 117 ntBASIC2.53□□□□□ -2
RNF180Q86T96 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RNF180Q86T96 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
RNF180Q86T96 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2.01
RNF180Q86T96 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
RNF180Q86T96 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
RNF180Q86T96 Y_RNA.76-201ENST00000362931 109 ntBASIC2.52□□□□□ -2.01
RNF180Q86T96 Y_RNA.117-201ENST00000363294 101 ntBASIC2.52□□□□□ -2.01
RNF180Q86T96 RNU2-14P-201ENST00000411053 191 ntBASIC2.52□□□□□ -2.01
RNF180Q86T96 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF180Q86T96 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.52□□□□□ -2.01
RNF180Q86T96 MIR6079-201ENST00000635807 62 ntBASIC2.52□□□□□ -2.01
RNF180Q86T96 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF180Q86T96 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF180Q86T96 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF180Q86T96 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF180Q86T96 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RNF180Q86T96 RNU6-950P-201ENST00000384651 107 ntBASIC2.51□□□□□ -2.01
RNF180Q86T96 RNA5SP511-201ENST00000410487 115 ntBASIC2.51□□□□□ -2.01
RNF180Q86T96 RNU2-7P-201ENST00000410794 178 ntBASIC2.51□□□□□ -2.01
RNF180Q86T96 RNU6-651P-201ENST00000411040 105 ntBASIC2.51□□□□□ -2.01
RNF180Q86T96 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RNF180Q86T96 AL135790.2-201ENST00000437701 267 ntBASIC2.51□□□□□ -2.01
RNF180Q86T96 SNORD2.1-201ENST00000458762 69 ntBASIC2.51□□□□□ -2.01
RNF180Q86T96 AL163195.1-201ENST00000496941 348 ntBASIC2.51□□□□□ -2.01
RNF180Q86T96 AC015720.1-201ENST00000565251 277 ntBASIC2.51□□□□□ -2.01
RNF180Q86T96 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.51□□□□□ -2.01
RNF180Q86T96 AC073349.3-201ENST00000617616 186 ntBASIC2.51□□□□□ -2.01
RNF180Q86T96 MIR548AY-201ENST00000617669 107 ntBASIC2.51□□□□□ -2.01
RNF180Q86T96 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.51□□□□□ -2.01
RNF180Q86T96 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RNF180Q86T96 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.51□□□□□ -2.01
RNF180Q86T96 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
RNF180Q86T96 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RNF180Q86T96 SNORA33-201ENST00000363664 130 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 RNU6-801P-201ENST00000364087 105 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 RNU6-136P-201ENST00000384663 107 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 MIR520A-201ENST00000384862 85 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RNF180Q86T96 RNU6-763P-201ENST00000390865 106 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 RNU6-907P-201ENST00000390924 102 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 MTCO2P33-201ENST00000402100 465 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.5□□□□□ -2.01
RNF180Q86T96 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.5□□□□□ -2.01
RNF180Q86T96 RNU6-1096P-201ENST00000517089 102 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 RNU7-128P-201ENST00000517247 62 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 AC084364.2-201ENST00000546924 395 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 POLR3GP1-201ENST00000594073 261 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 AL442067.1-201ENST00000613261 223 ntBASIC2.5□□□□□ -2.01
RNF180Q86T96 MIR6132-201ENST00000622083 109 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms