Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 MIR196B-201ENST00000384852 84 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 MIR29B2-201ENST00000385055 81 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 RNA5SP511-201ENST00000410487 115 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 RNA5SP38-201ENST00000410750 119 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 AC097463.2-201ENST00000421074 142 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 SUMO1P4-201ENST00000429430 302 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 SNORD77.4-201ENST00000516158 81 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 RNU6-168P-201ENST00000516189 101 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 RNU6-63P-201ENST00000516690 95 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 AC015720.1-201ENST00000565251 277 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 AC091178.2-201ENST00000584401 117 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 AC006435.5-201ENST00000624486 112 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 AC009487.4-201ENST00000624969 3585 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 AL136360.1-201ENST00000503377 1900 ntBASIC2.74□□□□□ -1.97
LIMS2Q7Z4I7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 Y_RNA.35-201ENST00000362601 101 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 SNORD21-201ENST00000383953 95 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 SNORA72-201ENST00000384339 132 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 SNORD14D-201ENST00000384390 87 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 RNU7-14P-201ENST00000459331 62 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 Y_RNA.651-201ENST00000459380 103 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 RPS26P45-201ENST00000471748 340 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 RNA5SP320-201ENST00000516263 124 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 RNA5SP148-201ENST00000516527 94 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 AC109329.2-201ENST00000519658 482 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 AC133485.4-201ENST00000561835 220 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 AC138907.4-201ENST00000570107 226 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 AL049861.1-201ENST00000603130 150 ntBASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LIMS2Q7Z4I7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 SNORA14A-201ENST00000364773 135 ntBASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 SNORD116-21-201ENST00000384507 92 ntBASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 RNU6-136P-201ENST00000384663 107 ntBASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 AC245102.2-201ENST00000448956 180 ntBASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 SNORA31.1-201ENST00000515993 133 ntBASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 SNORA31.5-201ENST00000516190 133 ntBASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 AC025647.1-201ENST00000517879 253 ntBASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 MIR4753-201ENST00000585119 83 ntBASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 uc_338.4-201ENST00000616635 176 ntBASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LIMS2Q7Z4I7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 RNU6-647P-201ENST00000364243 107 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 Y_RNA.634-201ENST00000364811 113 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 RNA5SP252-201ENST00000391131 119 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 ATP5EP1-201ENST00000510257 156 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 RNU6-1061P-201ENST00000516530 99 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 Y_RNA.690-201ENST00000516603 95 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 Y_RNA.694-201ENST00000516677 117 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 MIR5194-201ENST00000582634 120 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 AL929325.1-201ENST00000603096 117 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 FO624990.1-201ENST00000636373 85 ntBASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
LIMS2Q7Z4I7 AC016717.2-201ENST00000609089 5141 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 Y_RNA.91-201ENST00000363042 107 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 RNU6-508P-201ENST00000363231 103 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 RNA5SP456-201ENST00000364002 114 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 RNU6-309P-201ENST00000364573 106 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 SNORD31B-201ENST00000364977 69 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 RNU6-1080P-201ENST00000383982 107 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 RNU1-138P-201ENST00000384093 164 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 MIR548A3-201ENST00000385297 97 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 MIR1294-201ENST00000408503 142 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 U6atac.2-201ENST00000408644 118 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 AC016717.1-201ENST00000448918 286 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 SNORD11-201ENST00000459124 84 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 RN7SKP19-201ENST00000516016 252 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 MIR449C-201ENST00000516047 92 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 RNU6-781P-201ENST00000516377 101 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 MIR3670-2-201ENST00000582974 65 ntBASIC2.7□□□□□ -1.98
LIMS2Q7Z4I7 MIR3670-1-201ENST00000584160 65 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms