Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MTCYBP39-201ENST00000437562 491 ntBASIC-1.69□□□□□ -2.68
VPS13CQ709C8 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.69□□□□□ -2.68
VPS13CQ709C8 MIR4264-201ENST00000583520 66 ntBASIC-1.69□□□□□ -2.68
VPS13CQ709C8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.69□□□□□ -2.68
VPS13CQ709C8 RNU6-509P-201ENST00000363519 107 ntBASIC-1.69□□□□□ -2.68
VPS13CQ709C8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
VPS13CQ709C8 snoU13.16-201ENST00000459350 104 ntBASIC-1.69□□□□□ -2.68
VPS13CQ709C8 AL356055.1-201ENST00000602528 446 ntBASIC-1.69□□□□□ -2.68
VPS13CQ709C8 AC023510.2-201ENST00000622162 746 ntBASIC-1.69□□□□□ -2.68
VPS13CQ709C8 AC126544.2-201ENST00000625174 749 ntBASIC-1.69□□□□□ -2.68
VPS13CQ709C8 RNU6-169P-201ENST00000365336 107 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 AC007283.2-201ENST00000424739 197 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 RNU6-202P-201ENST00000515998 96 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 SNORA59B-202ENST00000578183 701 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 AL158211.4-201ENST00000606988 584 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 AC243428.1-201ENST00000421099 264 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 RPP40P1-201ENST00000426762 456 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.7□□□□□ -2.68
VPS13CQ709C8 SNORA40.17-201ENST00000517256 115 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 AL512347.1-201ENST00000566420 503 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.7□□□□□ -2.68
VPS13CQ709C8 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.7□□□□□ -2.68
VPS13CQ709C8 HMGB1P51-201ENST00000605166 638 ntBASIC-1.7□□□□□ -2.68
VPS13CQ709C8 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 AC090517.1-201ENST00000569307 266 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 SNORD115-33-201ENST00000363723 82 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 RNU6-932P-201ENST00000391108 106 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 PSMA6P3-201ENST00000428242 164 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 MTATP6P17-201ENST00000431030 672 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 RNU2-56P-201ENST00000516826 190 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 MTCYBP33-201ENST00000575007 1130 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 AC108747.1-201ENST00000609508 535 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 AC008134.1-201ENST00000420943 193 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 AC079781.2-201ENST00000446424 169 ntBASIC-1.71□□□□□ -2.68
VPS13CQ709C8 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-1.71□□□□□ -2.68
VPS13CQ709C8 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-1.71□□□□□ -2.68
VPS13CQ709C8 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.72□□□□□ -2.68
VPS13CQ709C8 RNU6-484P-201ENST00000384016 107 ntBASIC-1.72□□□□□ -2.68
VPS13CQ709C8 MIR516B2-201ENST00000385190 85 ntBASIC-1.72□□□□□ -2.68
VPS13CQ709C8 RNU2-54P-201ENST00000410299 190 ntBASIC-1.72□□□□□ -2.68
VPS13CQ709C8 BTF3L4P3-201ENST00000418879 476 ntBASIC-1.72□□□□□ -2.68
VPS13CQ709C8 MIR549A-201ENST00000385268 96 ntBASIC-1.72□□□□□ -2.68
VPS13CQ709C8 AL353813.1-201ENST00000440700 253 ntBASIC-1.72□□□□□ -2.68
VPS13CQ709C8 RNU7-128P-201ENST00000517247 62 ntBASIC-1.72□□□□□ -2.68
VPS13CQ709C8 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.72□□□□□ -2.69
VPS13CQ709C8 MIR548A2-201ENST00000384956 97 ntBASIC-1.72□□□□□ -2.69
VPS13CQ709C8 RPL39P25-201ENST00000449384 154 ntBASIC-1.72□□□□□ -2.69
VPS13CQ709C8 RPL7P42-201ENST00000481005 679 ntBASIC-1.72□□□□□ -2.69
VPS13CQ709C8 VN1R87P-201ENST00000596706 487 ntBASIC-1.72□□□□□ -2.69
VPS13CQ709C8 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 MIR136-201ENST00000385207 82 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 RNA5SP390-201ENST00000410191 113 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.73□□□□□ -2.69
VPS13CQ709C8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-1.73□□□□□ -2.69
VPS13CQ709C8 MIR548AM-201ENST00000584298 74 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.73□□□□□ -2.69
VPS13CQ709C8 SNORD45.3-201ENST00000363836 72 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 SNORD115-35-201ENST00000365122 82 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 RNU6-754P-201ENST00000391166 107 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 MTCYBP8-201ENST00000422855 651 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 HIGD1AP6-201ENST00000521833 279 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 SNORD115-40-201ENST00000606510 82 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 U6.108-201ENST00000637764 58 ntBASIC-1.73□□□□□ -2.69
VPS13CQ709C8 SNORD115-25-201ENST00000362619 82 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 SNORA24-201ENST00000384096 131 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-1.74□□□□□ -2.69
VPS13CQ709C8 RNU7-28P-201ENST00000516759 62 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.74□□□□□ -2.69
VPS13CQ709C8 AL049777.1-201ENST00000622740 518 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 RNU6-230P-201ENST00000362457 104 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 RNU6-905P-201ENST00000384434 107 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-1.74□□□□□ -2.69
VPS13CQ709C8 U8.19-201ENST00000459095 133 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 AC016632.1-201ENST00000503994 196 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 RNU6-416P-201ENST00000516265 103 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-1.74□□□□□ -2.69
VPS13CQ709C8 AC103996.1-201ENST00000555468 102 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 SNORA75.4-201ENST00000391278 119 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 POLR3GP1-201ENST00000594073 261 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 AL161798.1-201ENST00000604630 131 ntBASIC-1.74□□□□□ -2.69
VPS13CQ709C8 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 MIR1253-201ENST00000408273 105 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.75□□□□□ -2.69
VPS13CQ709C8 RNY4P9-201ENST00000363194 97 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 MIR562-201ENST00000384894 95 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 SNORD41.1-201ENST00000391000 69 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 SNORD2-201ENST00000459163 69 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 AC091951.3-201ENST00000504093 246 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.75□□□□□ -2.69
VPS13CQ709C8 AC138649.3-201ENST00000622154 254 ntBASIC-1.75□□□□□ -2.69
VPS13CQ709C8 SGO1P1-201ENST00000603525 1447 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms