Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MTCO2P24-201ENST00000515611 426 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 RNY3P15-201ENST00000516297 97 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 RNU7-172P-201ENST00000517125 64 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 MIR4524B-201ENST00000581569 115 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 AC091178.2-201ENST00000584401 117 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 MIR8081-201ENST00000611533 95 ntBASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.84-201ENST00000363011 104 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.368-201ENST00000365547 113 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 MIR215-201ENST00000384858 110 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 RNU11-5P-201ENST00000391216 129 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 RPL23AP6-201ENST00000446637 472 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 AC098869.1-201ENST00000481627 292 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-1337P-201ENST00000516525 95 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-635P-201ENST00000516651 102 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 RNA5SP437-201ENST00000517249 129 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 AC027419.1-201ENST00000522976 328 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 DEFB122-202ENST00000569013 197 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 MIR3122-201ENST00000577243 73 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 DEFB117-201ENST00000602356 141 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 AC022217.4-201ENST00000604389 163 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 MIR8062-201ENST00000621515 85 ntBASIC1.98□□□□□ -2.09
SYNE3Q6ZMZ3 AC018630.2-201ENST00000534866 2403 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.459-201ENST00000384251 102 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 MIR764-201ENST00000390811 85 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 Y_RNA.602-201ENST00000410535 92 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-1203P-201ENST00000410703 110 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 MTCYBP9-201ENST00000431021 303 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 POLR2KP2-201ENST00000438155 177 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 MTND4LP30-201ENST00000454092 297 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 RNU7-94P-201ENST00000459576 63 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 RNU6-237P-201ENST00000515985 71 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 AL161670.1-201ENST00000554348 137 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 MIR4713-201ENST00000582691 75 ntBASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.97□□□□□ -2.09
SYNE3Q6ZMZ3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
SYNE3Q6ZMZ3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 RNA5SP432-201ENST00000362480 116 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-324P-201ENST00000363957 106 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 Y_RNA.310-201ENST00000365063 113 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-326P-201ENST00000365480 107 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-472P-201ENST00000384299 107 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 RNA5SP323-201ENST00000391094 133 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 CYCSP49-201ENST00000420810 319 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 AL162725.1-201ENST00000435405 301 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 AL135790.2-201ENST00000437701 267 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 AL606517.2-201ENST00000442855 241 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 RNA5SP481-201ENST00000516814 122 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 SNORA31.17-201ENST00000516953 127 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 AC073413.2-201ENST00000604332 360 ntBASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
SYNE3Q6ZMZ3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-1309P-201ENST00000363305 108 ntBASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 Y_RNA.149-201ENST00000363558 117 ntBASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 Y_RNA.176-201ENST00000363815 109 ntBASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 AL627390.1-201ENST00000396055 340 ntBASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 snoU13.23-201ENST00000458863 104 ntBASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 AC015720.1-201ENST00000565251 277 ntBASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 AC004832.4-201ENST00000608952 331 ntBASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 AP001282.2-201ENST00000616149 309 ntBASIC1.95□□□□□ -2.1
SYNE3Q6ZMZ3 SNORD116-13-201ENST00000384408 92 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 Y_RNA.569-201ENST00000384749 103 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-713P-201ENST00000384761 107 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 MIR520G-201ENST00000385064 90 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-1248P-201ENST00000391096 64 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 AC024067.1-201ENST00000426199 223 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 AL591806.2-201ENST00000433122 173 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 MTCO1P5-201ENST00000433573 344 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 HSPE1P21-201ENST00000438283 308 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 RPS20P10-201ENST00000451209 253 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-341P-201ENST00000516973 96 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 AL358944.1-201ENST00000528537 144 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 AL078604.3-201ENST00000615580 211 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 MIR6079-201ENST00000635807 62 ntBASIC1.94□□□□□ -2.1
SYNE3Q6ZMZ3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 MIR335-201ENST00000362173 94 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 RNU6-661P-201ENST00000362409 107 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 Y_RNA.47-201ENST00000362697 108 ntBASIC1.93□□□□□ -2.1
SYNE3Q6ZMZ3 RNU4-80P-201ENST00000363200 141 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms